RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Ptpn12P35831 775 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Scnn1aQ61180 699 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Acbd3Q8BMP6 525 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Znf467Q8JZL0 594 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Pspc1Q8R326 523 aaKnown RBP11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Creb3l3Q91XE9 479 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Trap1Q9CQN1 706 aaKnown RBP11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cyp2s1Q9DBX6 501 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tex21Q9R0U9 575 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Flt1P35969 1333 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm11985A0A1B0GS61 206 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Snx12O70493 165 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gdf10P97737 476 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Fam183bQ5NC57 135 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 LnpkQ7TQ95 425 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Rcor2Q8C796 523 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sox30Q8CGW4 782 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 CactinQ9CS00 772 aaKnown RBP11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ptf1aQ9QX98 324 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cacna2d3Q9Z1L5 1091 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 GsdmeQ9Z2D3 512 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Casz1Q9CWL2 1761 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ptpn23Q6PB44 1692 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Csf1rP09581 977 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Lmnb1P14733 588 aaKnown RBP11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Adcy7P51829 1099 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sema3eP70275 775 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Meis3P97368 378 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ctnna2Q61301 953 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Maip1Q8BHE8 291 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Dph5Q9CWQ0 281 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 RpainQ9CWY9 219 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tbx18Q9EPZ6 613 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Robo1O89026 1612 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Gm43738A0A0G2JEA5 862 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Zfand4D3Z3C6 739 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arhgap6O54834 987 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rnaseh1O70338 285 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tnnc1P19123 161 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Pola2P33611 600 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ercc5P35689 1170 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Setd4P58467 439 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 NyxP83503 476 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc10a4Q3UEZ8 437 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tigd5Q499M4 642 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 BcrQ6PAJ1 1270 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Olfr119Q7TRJ5 321 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 HhatQ8BMT9 499 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 AopepQ8BXQ6 817 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Fam161bQ8CB59 589 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Mrgprx1Q8CIP3 322 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tldc1Q8K0P3 455 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Tube1Q9D6T1 475 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Paip2Q9D6V8 124 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rwdd2aQ9D9S3 292 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc5a4aQ9ET37 656 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Scp2P32020 547 aaKnown RBP11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Man1a2P39098 641 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Polr2fP61219 127 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cfap52Q5F201 620 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Krt74Q6IFZ9 495 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Clca4aQ6Q473 924 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Peg10Q7TN75 958 aaKnown RBP11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Dclk3Q8BWQ5 790 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ccdc169Q8BXX9 214 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Zhx2Q8C0C0 836 aaKnown RBP11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 EpgnQ924X1 152 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Eps8l2Q99K30 729 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Serpinb12Q9D7P9 423 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rbm6S4R1W5 1118 aaKnown RBP11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ssc5dQ8BV57 1371 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Adgra3Q7TT36 1310 aa11.83□□□□□ -0.52
Msh3-201ENSMUST00000022220 Zfp42P22227 288 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Akr1b1P45376 316 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sox13Q04891 613 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ddx3yQ62095 658 aaKnown RBP11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 PnocQ64387 187 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Fbxo10Q7TQF2 950 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rfc4Q99J62 364 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 CutaQ9CQ89 177 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 GrapQ9CX99 217 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Taf1dQ9D4V4 322 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sdr42e1Q9D665 394 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 CatspereP0DP43 985 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Aco1P28271 889 aaKnown RBP11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cap1P40124 474 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc8a1P70414 970 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Acot6Q32Q92 419 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Ankfy1Q810B6 1169 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Kbtbd13Q8C828 458 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Col23a1Q8K4G2 532 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Slc5a5Q99PN0 618 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Rnaseh2aQ9CWY8 301 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Eif2ak1Q9Z2R9 619 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Mmp20P57748 482 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Arhgap44Q5SSM3 814 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Churc1Q6DG52 112 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Fnbp1Q80TY0 616 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Cep104Q80V31 926 aa11.82□□□□□ -0.52
Msh3-201ENSMUST00000022220 Sirt2Q8VDQ8 389 aa11.82□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms