RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W TY2A-GR2P0CX62 438 aa5.84□□□□□ -1.47
CAF40YNL288W SGV1P23293 657 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W TY2A-CP25383 438 aa5.84□□□□□ -1.47
CAF40YNL288W FUN30P31380 1131 aa5.84□□□□□ -1.47
CAF40YNL288W SRB5P32585 307 aa5.84□□□□□ -1.47
CAF40YNL288W TAF14P35189 244 aa5.84□□□□□ -1.47
CAF40YNL288W VPS21P36017 210 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W FTH1P38310 465 aa5.84□□□□□ -1.47
CAF40YNL288W YBR238CP38330 731 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W FRT2P39734 528 aa5.84□□□□□ -1.47
CAF40YNL288W CCT7P42943 550 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W YFL054CP43549 646 aa5.84□□□□□ -1.47
CAF40YNL288W GTO1P48239 356 aa5.84□□□□□ -1.47
CAF40YNL288W SDT1P53078 280 aa5.84□□□□□ -1.47
CAF40YNL288W IDP3P53982 420 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W PRO2P54885 456 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W PRP38Q00723 242 aaPredicted RBP5.84□□□□□ -1.47
CAF40YNL288W IRC15Q02733 499 aa5.84□□□□□ -1.47
CAF40YNL288W TY2A-DR2Q03483 438 aa5.84□□□□□ -1.47
CAF40YNL288W XYL2Q07993 356 aa5.84□□□□□ -1.47
CAF40YNL288W TY2A-BQ12260 438 aa5.84□□□□□ -1.47
CAF40YNL288W TY2A-OR2Q12293 438 aa5.84□□□□□ -1.47
CAF40YNL288W TY2A-DR1Q12392 438 aa5.84□□□□□ -1.47
CAF40YNL288W TY2A-OR1Q12439 438 aa5.84□□□□□ -1.47
CAF40YNL288W PNO1Q99216 274 aaKnown RBP5.84□□□□□ -1.47
CAF40YNL288W TY2A-DR3Q99303 438 aa5.84□□□□□ -1.47
CAF40YNL288W PRP2P20095 876 aaPredicted RBP5.83□□□□□ -1.48
CAF40YNL288W DAL82P21705 255 aa5.83□□□□□ -1.48
CAF40YNL288W PHO91P27514 894 aa5.83□□□□□ -1.48
CAF40YNL288W SSH4P32343 579 aa5.83□□□□□ -1.48
CAF40YNL288W PET127P32606 800 aa5.83□□□□□ -1.48
CAF40YNL288W EHT1P38295 451 aa5.83□□□□□ -1.48
CAF40YNL288W RFC3P38629 340 aa5.83□□□□□ -1.48
CAF40YNL288W RLP7P40693 322 aaKnown RBP5.83□□□□□ -1.48
CAF40YNL288W MAD2P40958 196 aa5.83□□□□□ -1.48
CAF40YNL288W IMA1P53051 589 aa5.83□□□□□ -1.48
CAF40YNL288W REX2P54964 269 aaKnown RBP5.83□□□□□ -1.48
CAF40YNL288W YDR124WQ04608 324 aa5.83□□□□□ -1.48
CAF40YNL288W GLO2Q05584 274 aa5.83□□□□□ -1.48
CAF40YNL288W RRP45Q05636 305 aaKnown RBP5.83□□□□□ -1.48
CAF40YNL288W YEH2Q07950 538 aa5.83□□□□□ -1.48
CAF40YNL288W BSC6Q08280 497 aa5.83□□□□□ -1.48
CAF40YNL288W HUA2Q12134 243 aa5.83□□□□□ -1.48
CAF40YNL288W SEC39Q12745 709 aa5.83□□□□□ -1.48
CAF40YNL288W Q0010Q9ZZX9 128 aa5.83□□□□□ -1.48
CAF40YNL288W DST1P07273 309 aa5.82□□□□□ -1.48
CAF40YNL288W RNA1P11745 407 aaKnown RBP5.82□□□□□ -1.48
CAF40YNL288W HOP1P20050 605 aa5.82□□□□□ -1.48
CAF40YNL288W TRX3P25372 127 aa5.82□□□□□ -1.48
CAF40YNL288W AAR2P32357 355 aaPredicted RBP5.82□□□□□ -1.48
CAF40YNL288W CDC5P32562 705 aa5.82□□□□□ -1.48
CAF40YNL288W SIP2P34164 415 aaKnown RBP5.82□□□□□ -1.48
CAF40YNL288W PTC1P35182 281 aa5.82□□□□□ -1.48
CAF40YNL288W FRE2P36033 711 aa5.82□□□□□ -1.48
CAF40YNL288W ASC1P38011 319 aaKnown RBP5.82□□□□□ -1.48
CAF40YNL288W YBL029WP38201 376 aa5.82□□□□□ -1.48
CAF40YNL288W AIM3P38266 947 aaKnown RBP5.82□□□□□ -1.48
CAF40YNL288W MET30P39014 640 aa5.82□□□□□ -1.48
CAF40YNL288W MEP2P41948 499 aa5.82□□□□□ -1.48
CAF40YNL288W AIM22P47051 409 aa5.82□□□□□ -1.48
CAF40YNL288W RPM2Q02773 1202 aa5.82□□□□□ -1.48
CAF40YNL288W MET31Q03081 177 aa5.82□□□□□ -1.48
CAF40YNL288W GET4Q12125 312 aa5.82□□□□□ -1.48
CAF40YNL288W YPR022CQ12139 1133 aa5.82□□□□□ -1.48
CAF40YNL288W GCD2P12754 651 aaPredicted RBP5.81□□□□□ -1.48
CAF40YNL288W PRP4P20053 465 aaKnown RBP5.81□□□□□ -1.48
CAF40YNL288W SLM5P25345 492 aaKnown RBP5.81□□□□□ -1.48
CAF40YNL288W RAD14P28519 371 aa5.81□□□□□ -1.48
CAF40YNL288W STE14P32584 239 aa5.81□□□□□ -1.48
CAF40YNL288W NRP1P32770 719 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
CAF40YNL288W SPO23P33757 523 aa5.81□□□□□ -1.48
CAF40YNL288W WBP1P33767 430 aaKnown RBP5.81□□□□□ -1.48
CAF40YNL288W YKR078WP36158 585 aaKnown RBP5.81□□□□□ -1.48
CAF40YNL288W APT2P36973 181 aa5.81□□□□□ -1.48
CAF40YNL288W CBP4P37267 147 aa5.81□□□□□ -1.48
CAF40YNL288W YRO2P38079 344 aa5.81□□□□□ -1.48
CAF40YNL288W LEU5P38702 357 aa5.81□□□□□ -1.48
CAF40YNL288W AYR1P40471 297 aa5.81□□□□□ -1.48
CAF40YNL288W CFD1P40558 293 aa5.81□□□□□ -1.48
CAF40YNL288W AZF1P41696 914 aa5.81□□□□□ -1.48
CAF40YNL288W ALR2P43553 858 aa5.81□□□□□ -1.48
CAF40YNL288W MPS3P47069 682 aa5.81□□□□□ -1.48
CAF40YNL288W HOC1P47124 396 aa5.81□□□□□ -1.48
CAF40YNL288W YGR012WP53206 393 aa5.81□□□□□ -1.48
CAF40YNL288W FHN1P53279 174 aa5.81□□□□□ -1.48
CAF40YNL288W RSM24Q03976 319 aa5.81□□□□□ -1.48
CAF40YNL288W SIZ1Q04195 904 aa5.81□□□□□ -1.48
CAF40YNL288W CDA1Q06702 301 aa5.81□□□□□ -1.48
CAF40YNL288W SGT1Q08446 395 aa5.81□□□□□ -1.48
CAF40YNL288W PUS9Q12069 462 aa5.81□□□□□ -1.48
CAF40YNL288W RUP1Q12242 671 aa5.81□□□□□ -1.48
CAF40YNL288W RPS17AP02407 136 aaKnown RBP5.8□□□□□ -1.48
CAF40YNL288W ARD1P07347 238 aaPredicted RBP5.8□□□□□ -1.48
CAF40YNL288W RPL11AP0C0W9 174 aaKnown RBP5.8□□□□□ -1.48
CAF40YNL288W MRP13P12686 339 aa5.8□□□□□ -1.48
CAF40YNL288W RPS17BP14127 136 aaKnown RBP5.8□□□□□ -1.48
CAF40YNL288W AGP1P25376 633 aa5.8□□□□□ -1.48
CAF40YNL288W MVD1P32377 396 aaKnown RBP5.8□□□□□ -1.48
CAF40YNL288W ERG1P32476 496 aaKnown RBP5.8□□□□□ -1.48
CAF40YNL288W CUE2P36075 443 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms