RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	SAN1	P22470	610 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	VPS34	P22543	875 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	CWH43	P25618	953 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	RFA2	P26754	273 aa	Known RBP	4.74	□□□□□ -1.65
DOA1	YKL213C	ASK1	P35734	292 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	IML3	P38265	245 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	SDH8	P38345	138 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	RFC3	P38629	340 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	WSC4	P38739	605 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	PCL6	P40038	420 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	MGS1	P40151	587 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	PIG2	P40187	538 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	YIL001W	P40560	513 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	TDA10	P42938	290 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	FAR3	P46671	204 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	BNA3	P47039	444 aa	Known RBP	4.74	□□□□□ -1.65
DOA1	YKL213C	COQ5	P49017	307 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	NBP35	P52920	328 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
DOA1	YKL213C	NHP10	Q03435	203 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	ECM18	Q04623	453 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	SNA4	Q07549	140 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	YDL129W	Q07555	291 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	GTT2	Q12390	233 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	FRE6	Q12473	712 aa		4.74	□□□□□ -1.65
DOA1	YKL213C	ACC1	Q00955	2233 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	COX6	P00427	148 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	IPP1	P00817	287 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	ARG80	P07249	177 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	TUB1	P09733	447 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	YKR104W	P0CE69	306 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	SBP1	P10080	294 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	GCD2	P12754	651 aa	Predicted RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	ERG1	P32476	496 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	YSC84	P32793	468 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	ATO2	P32907	282 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	TIP20	P33891	701 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	THI80	P35202	319 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YKL151C	P36059	337 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	UTH1	P36135	365 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	MCM7	P38132	845 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YBR062C	P38239	180 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	EFM1	P38732	585 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YPT35	P38815	214 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	CYC2	P38909	366 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	TPA1	P40032	644 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	MSS2	P40990	351 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	ELP2	P42935	788 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YFR018C	P43599	363 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	ARC1	P46672	376 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	NOP9	P47077	666 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	RPA14	P50106	137 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	TAF6	P53040	516 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YGL108C	P53139	140 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	UGO1	Q03327	502 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YMR155W	Q03795	547 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	VBA4	Q04602	768 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	ESA1	Q08649	445 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	APC9	Q12107	265 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	UPC2	Q12151	913 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YOR012W	Q12351	137 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	SKM1	Q12469	655 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	NAG1	Q8TGN9	163 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	ARG3	P05150	338 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YMR085W	P0CF18	432 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	CUP1-1	P0CX80	61 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	CUP1-2	P0CX81	61 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	POL30	P15873	258 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	BAS1	P22035	811 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	NPR1	P22211	790 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	RER1	P25560	188 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	PTM1	P32857	523 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	SEC61	P32915	480 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	GMH1	P36125	273 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	NTC20	P38302	140 aa	Predicted RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	EGD2	P38879	174 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	FAA3	P39002	694 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	HPM1	P40481	377 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
DOA1	YKL213C	YGL176C	P46945	554 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	GTO1	P48239	356 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	SSU72	P53538	206 aa	Predicted RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	SNO2	P53823	222 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	EOS1	P53938	366 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YPL107W	Q02873	248 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	NAN1	Q02931	896 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	YPL113C	Q02961	396 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	RSN1	Q03516	953 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	GOT1	Q03554	138 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	CCE1	Q03702	353 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	ARX1	Q03862	593 aa	Known RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	ARG7	Q04728	441 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	RCO1	Q04779	684 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YPR091C	Q06833	770 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	SNU23	Q12368	194 aa	Predicted RBP	4.73	□□□□□ -1.65
DOA1	YKL213C	SKS1	Q12505	502 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	YPL247C	Q12523	523 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	MDM12	Q92328	271 aa		4.73	□□□□□ -1.65
DOA1	YKL213C	CDC36	P06100	191 aa	Predicted RBP	4.72	□□□□□ -1.65
DOA1	YKL213C	SPT15	P13393	240 aa	Known RBP	4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms