RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W ADE17P38009 592 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W YNG2P38806 282 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W LNP1P38878 278 aa2.22□□□□□ -2.05
NUP100YKL068W RCY1P39531 840 aa2.22□□□□□ -2.05
NUP100YKL068W BRO1P48582 844 aa2.22□□□□□ -2.05
NUP100YKL068W VOA1P53262 265 aa2.22□□□□□ -2.05
NUP100YKL068W FHN1P53279 174 aa2.22□□□□□ -2.05
NUP100YKL068W EFM6P53970 246 aa2.22□□□□□ -2.05
NUP100YKL068W RSM24Q03976 319 aa2.22□□□□□ -2.05
NUP100YKL068W URH1Q04179 340 aa2.22□□□□□ -2.05
NUP100YKL068W RRG8Q06109 277 aa2.22□□□□□ -2.05
NUP100YKL068W GPN3Q06543 272 aa2.22□□□□□ -2.05
NUP100YKL068W LEA1Q08963 238 aaPredicted RBP2.22□□□□□ -2.05
NUP100YKL068W BTS1Q12051 335 aa2.22□□□□□ -2.05
NUP100YKL068W TGS1Q12052 315 aa2.22□□□□□ -2.05
NUP100YKL068W SPO24Q3E752 67 aa2.22□□□□□ -2.05
NUP100YKL068W YBL111CQ3E7Y5 667 aa2.22□□□□□ -2.05
NUP100YKL068W MDN1Q12019 4910 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W AAC1P04710 309 aa2.22□□□□□ -2.05
NUP100YKL068W RNR2P09938 399 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W ALG1P16661 449 aa2.22□□□□□ -2.05
NUP100YKL068W PDE1P22434 369 aa2.22□□□□□ -2.05
NUP100YKL068W BCS1P32839 456 aa2.22□□□□□ -2.05
NUP100YKL068W PAD1P33751 242 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
NUP100YKL068W NTR2P36118 322 aaPredicted RBP2.22□□□□□ -2.05
NUP100YKL068W OTU1P43558 301 aa2.22□□□□□ -2.05
NUP100YKL068W TOS3P43637 560 aa2.22□□□□□ -2.05
NUP100YKL068W RMR1P53060 241 aa2.22□□□□□ -2.05
NUP100YKL068W DSL1P53847 754 aa2.22□□□□□ -2.05
NUP100YKL068W MFM1Q02783 413 aa2.22□□□□□ -2.05
NUP100YKL068W MUK1Q02866 612 aa2.22□□□□□ -2.05
NUP100YKL068W NRG1Q03125 231 aa2.22□□□□□ -2.05
NUP100YKL068W CTS2Q06350 511 aa2.22□□□□□ -2.05
NUP100YKL068W YPR078CQ06813 372 aa2.22□□□□□ -2.05
NUP100YKL068W RTT109Q07794 436 aa2.22□□□□□ -2.05
NUP100YKL068W SLK19Q08581 821 aaKnown RBP2.22□□□□□ -2.05
NUP100YKL068W YOR389WQ08912 624 aa2.22□□□□□ -2.05
NUP100YKL068W YPL278CQ08990 100 aa2.22□□□□□ -2.05
NUP100YKL068W RRD2Q12461 358 aa2.22□□□□□ -2.05
NUP100YKL068W ZPS1Q12512 249 aa2.22□□□□□ -2.05
NUP100YKL068W PUT2P07275 575 aa2.21□□□□□ -2.06
NUP100YKL068W HXT2P23585 541 aa2.21□□□□□ -2.06
NUP100YKL068W RVS161P25343 265 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W PUP3P25451 205 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W YUR1P26725 428 aa2.21□□□□□ -2.06
NUP100YKL068W GSY2P27472 705 aa2.21□□□□□ -2.06
NUP100YKL068W PMI40P29952 429 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W YPS1P32329 569 aa2.21□□□□□ -2.06
NUP100YKL068W YKL071WP36086 256 aa2.21□□□□□ -2.06
NUP100YKL068W MAL32P38158 584 aa2.21□□□□□ -2.06
NUP100YKL068W PTC7P38797 343 aa2.21□□□□□ -2.06
NUP100YKL068W GPI16P38875 610 aa2.21□□□□□ -2.06
NUP100YKL068W ALP1P38971 573 aa2.21□□□□□ -2.06
NUP100YKL068W FUN12P39730 1002 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W YFR020WP43600 232 aa2.21□□□□□ -2.06
NUP100YKL068W CHA4P43634 648 aa2.21□□□□□ -2.06
NUP100YKL068W NPA3P47122 385 aa2.21□□□□□ -2.06
NUP100YKL068W GTF1P53260 183 aaPredicted RBP2.21□□□□□ -2.06
NUP100YKL068W MAL12P53341 584 aa2.21□□□□□ -2.06
NUP100YKL068W CTK1Q03957 528 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W FRE5Q08908 694 aa2.21□□□□□ -2.06
NUP100YKL068W DCP1Q12517 231 aaPredicted RBP2.21□□□□□ -2.06
NUP100YKL068W RRP12Q12754 1228 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W COX3P00420 269 aa2.21□□□□□ -2.06
NUP100YKL068W YPK2P18961 677 aa2.21□□□□□ -2.06
NUP100YKL068W CWP1P28319 239 aa2.21□□□□□ -2.06
NUP100YKL068W ECT1P33412 323 aa2.21□□□□□ -2.06
NUP100YKL068W MRPL7P36519 292 aa2.21□□□□□ -2.06
NUP100YKL068W RPP1P38786 293 aa2.21□□□□□ -2.06
NUP100YKL068W YMR147WP40218 223 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W PTR3P43606 678 aa2.21□□□□□ -2.06
NUP100YKL068W DPB11P47027 764 aaPredicted RBP2.21□□□□□ -2.06
NUP100YKL068W PRY1P47032 299 aa2.21□□□□□ -2.06
NUP100YKL068W ABM1P47146 123 aa2.21□□□□□ -2.06
NUP100YKL068W TOM22P49334 152 aa2.21□□□□□ -2.06
NUP100YKL068W YNL146WP53906 100 aa2.21□□□□□ -2.06
NUP100YKL068W ADE16P54113 591 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W SLT2Q00772 484 aa2.21□□□□□ -2.06
NUP100YKL068W YDR109CQ04585 715 aa2.21□□□□□ -2.06
NUP100YKL068W COX20Q04935 205 aa2.21□□□□□ -2.06
NUP100YKL068W GGA1Q06336 557 aa2.21□□□□□ -2.06
NUP100YKL068W TDA6Q06466 467 aa2.21□□□□□ -2.06
NUP100YKL068W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06 RIP-Chip
NUP100YKL068W PKH2Q12236 1081 aaKnown RBP2.21□□□□□ -2.06
NUP100YKL068W YBR255C-AQ3E776 120 aa2.21□□□□□ -2.06
NUP100YKL068W MATALPHA1P0CY06 175 aa2.2□□□□□ -2.06
NUP100YKL068W HMLALPHA1P0CY07 175 aa2.2□□□□□ -2.06
NUP100YKL068W PRE10P21242 288 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
NUP100YKL068W RAD14P28519 371 aa2.2□□□□□ -2.06
NUP100YKL068W PSO2P30620 661 aa2.2□□□□□ -2.06
NUP100YKL068W MEI5P32489 222 aa2.2□□□□□ -2.06
NUP100YKL068W ECM25P32525 599 aa2.2□□□□□ -2.06
NUP100YKL068W FRE1P32791 686 aa2.2□□□□□ -2.06
NUP100YKL068W CYM1P32898 989 aa2.2□□□□□ -2.06
NUP100YKL068W IML3P38265 245 aa2.2□□□□□ -2.06
NUP100YKL068W ICS2P38284 255 aa2.2□□□□□ -2.06
NUP100YKL068W YHR177WP38867 453 aa2.2□□□□□ -2.06
NUP100YKL068W PLB1P39105 664 aa2.2□□□□□ -2.06
NUP100YKL068W ELO1P39540 310 aa2.2□□□□□ -2.06
NUP100YKL068W ATM1P40416 690 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms