RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W KIN28P06242 306 aa4.3□□□□□ -1.72
AVT1YJR001W FBA1P14540 359 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W POL30P15873 258 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W CBF1P17106 351 aa4.3□□□□□ -1.72
AVT1YJR001W UGA1P17649 471 aa4.3□□□□□ -1.72
AVT1YJR001W PRE10P21242 288 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
AVT1YJR001W CHL1P22516 861 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W YCL068CP25593 260 aa4.3□□□□□ -1.72
AVT1YJR001W PET127P32606 800 aa4.3□□□□□ -1.72
AVT1YJR001W WBP1P33767 430 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W SRP102P36057 244 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W DBP7P36120 742 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W APN2P38207 520 aa4.3□□□□□ -1.72
AVT1YJR001W SUL1P38359 859 aa4.3□□□□□ -1.72
AVT1YJR001W FHL1P39521 936 aa4.3□□□□□ -1.72
AVT1YJR001W GID8P40208 455 aa4.3□□□□□ -1.72
AVT1YJR001W ALG8P40351 577 aa4.3□□□□□ -1.72
AVT1YJR001W HXT14P42833 540 aa4.3□□□□□ -1.72
AVT1YJR001W TDA10P42938 290 aa4.3□□□□□ -1.72
AVT1YJR001W YFH7P43591 353 aa4.3□□□□□ -1.72
AVT1YJR001W MSE1P48525 536 aa4.3□□□□□ -1.72
AVT1YJR001W NSA1P53136 463 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W TAM41P53230 385 aa4.3□□□□□ -1.72
AVT1YJR001W RPT4P53549 437 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YMR265CQ03508 461 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YMD8Q03697 442 aa4.3□□□□□ -1.72
AVT1YJR001W YDR444WQ04093 687 aa4.3□□□□□ -1.72
AVT1YJR001W SMA2Q04658 369 aa4.3□□□□□ -1.72
AVT1YJR001W CRF1Q04930 467 aa4.3□□□□□ -1.72
AVT1YJR001W STE23Q06010 1027 aa4.3□□□□□ -1.72
AVT1YJR001W SDO1Q07953 250 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YOL107WQ12239 342 aa4.3□□□□□ -1.72
AVT1YJR001W NDJ1Q12366 352 aa4.3□□□□□ -1.72
AVT1YJR001W SNU23Q12368 194 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W ERG27Q12452 347 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W RPP2AP05319 106 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W CBP6P07253 162 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W RPL3P14126 387 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W SNF5P18480 905 aa4.3□□□□□ -1.72
AVT1YJR001W VPS33P20795 691 aa4.3□□□□□ -1.72
AVT1YJR001W PRE4P30657 266 aa4.3□□□□□ -1.72
AVT1YJR001W MAL32P38158 584 aa4.3□□□□□ -1.72
AVT1YJR001W RFC5P38251 354 aa4.3□□□□□ -1.72
AVT1YJR001W RRP3P38712 501 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YHR045WP38775 560 aa4.3□□□□□ -1.72
AVT1YJR001W RPH1P39956 796 aa4.3□□□□□ -1.72
AVT1YJR001W YMR134WP40207 237 aa4.3□□□□□ -1.72
AVT1YJR001W YJL132WP47014 750 aa4.3□□□□□ -1.72
AVT1YJR001W YJR054WP47114 497 aa4.3□□□□□ -1.72
AVT1YJR001W NPA3P47122 385 aa4.3□□□□□ -1.72
AVT1YJR001W IMD3P50095 523 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YGL204CP53089 101 aa4.3□□□□□ -1.72
AVT1YJR001W YGL036WP53185 909 aaPredicted RBP4.3□□□□□ -1.72
AVT1YJR001W SLI1P53304 468 aa4.3□□□□□ -1.72
AVT1YJR001W RTT102P53330 157 aa4.3□□□□□ -1.72
AVT1YJR001W MAL12P53341 584 aa4.3□□□□□ -1.72
AVT1YJR001W DIA1P54005 336 aa4.3□□□□□ -1.72
AVT1YJR001W HCR1Q05775 265 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W YDL129WQ07555 291 aa4.3□□□□□ -1.72
AVT1YJR001W WHI4Q07655 649 aaKnown RBP4.3□□□□□ -1.72
AVT1YJR001W AI1P03875 834 aa4.29□□□□□ -1.72
AVT1YJR001W ILV5P06168 395 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W RPL35AP0CX84 120 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W RPL35BP0CX85 120 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W HMG2P12684 1045 aa4.29□□□□□ -1.72
AVT1YJR001W FRS1P15624 595 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W IDH2P28241 369 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W MVD1P32377 396 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W RTG1P32607 177 aa4.29□□□□□ -1.72
AVT1YJR001W TCA17P32613 152 aa4.29□□□□□ -1.72
AVT1YJR001W VAM7P32912 316 aa4.29□□□□□ -1.72
AVT1YJR001W FMO1P38866 432 aa4.29□□□□□ -1.72
AVT1YJR001W AKR1P39010 764 aa4.29□□□□□ -1.72
AVT1YJR001W ACO2P39533 789 aa4.29□□□□□ -1.72
AVT1YJR001W AIM24P47127 394 aa4.29□□□□□ -1.72
AVT1YJR001W YJR141WP47172 347 aaPredicted RBP4.29□□□□□ -1.72
AVT1YJR001W YJR154WP47181 346 aa4.29□□□□□ -1.72
AVT1YJR001W ADE16P54113 591 aaKnown RBP4.29□□□□□ -1.72
AVT1YJR001W ACL4Q03771 387 aa4.29□□□□□ -1.72
AVT1YJR001W YDR179W-AQ03983 463 aa4.29□□□□□ -1.72
AVT1YJR001W BNA7Q04066 261 aa4.29□□□□□ -1.72
AVT1YJR001W SWF1Q04629 336 aa4.29□□□□□ -1.72
AVT1YJR001W STP3Q05937 343 aa4.29□□□□□ -1.72
AVT1YJR001W SMC5Q08204 1093 aa4.29□□□□□ -1.72
AVT1YJR001W LEA1Q08963 238 aaPredicted RBP4.29□□□□□ -1.72
AVT1YJR001W VAM3Q12241 283 aa4.29□□□□□ -1.72
AVT1YJR001W RPL25P04456 142 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W LEU4P06208 619 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W GPH1P06738 902 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W GPA2P10823 449 aa4.28□□□□□ -1.72
AVT1YJR001W KRS1P15180 591 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W SPO7P18410 259 aa4.28□□□□□ -1.72
AVT1YJR001W SAG1P20840 650 aa4.28□□□□□ -1.72
AVT1YJR001W MEK1P24719 497 aaPredicted RBP4.28□□□□□ -1.72
AVT1YJR001W ATP7P30902 174 aa4.28□□□□□ -1.72
AVT1YJR001W SPT10P35208 640 aa4.28□□□□□ -1.72
AVT1YJR001W ELF1P36053 145 aa4.28□□□□□ -1.72
AVT1YJR001W TCD2P36101 447 aaKnown RBP4.28□□□□□ -1.72
AVT1YJR001W TAT1P38085 619 aa4.28□□□□□ -1.72
AVT1YJR001W ECM21P38167 1117 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms