RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W RXT3Q07458 294 aa5.88□□□□□ -1.47
PRE3YJL001W NOP6Q07623 225 aaKnown RBP5.88□□□□□ -1.47
PRE3YJL001W TPO4Q12256 659 aa5.88□□□□□ -1.47
PRE3YJL001W SSA3P09435 649 aaKnown RBP5.87□□□□□ -1.47
PRE3YJL001W YJU2P28320 278 aaPredicted RBP5.87□□□□□ -1.47
PRE3YJL001W PAP1P29468 568 aaKnown RBP5.87□□□□□ -1.47
PRE3YJL001W OAF3P36023 863 aa5.87□□□□□ -1.47
PRE3YJL001W SSZ1P38788 538 aaKnown RBP5.87□□□□□ -1.47
PRE3YJL001W EMP65P40085 556 aa5.87□□□□□ -1.47
PRE3YJL001W CUP9P41817 306 aa5.87□□□□□ -1.47
PRE3YJL001W CHA4P43634 648 aa5.87□□□□□ -1.47
PRE3YJL001W HOC1P47124 396 aa5.87□□□□□ -1.47
PRE3YJL001W BOL2P53082 120 aa5.87□□□□□ -1.47
PRE3YJL001W MDM34P53083 459 aa5.87□□□□□ -1.47
PRE3YJL001W SLD3P53135 668 aa5.87□□□□□ -1.47
PRE3YJL001W GOT1Q03554 138 aa5.87□□□□□ -1.47
PRE3YJL001W BCH1Q05029 724 aa5.87□□□□□ -1.47
PRE3YJL001W ASM4Q05166 528 aa5.87□□□□□ -1.47
PRE3YJL001W MMT2Q08970 484 aa5.87□□□□□ -1.47
PRE3YJL001W SWM1Q12379 170 aa5.87□□□□□ -1.47
PRE3YJL001W SLH1P53327 1967 aaKnown RBP5.86□□□□□ -1.47
PRE3YJL001W STE3P06783 470 aa5.86□□□□□ -1.47
PRE3YJL001W RSR1P13856 272 aa5.86□□□□□ -1.47
PRE3YJL001W CBF1P17106 351 aa5.86□□□□□ -1.47
PRE3YJL001W GRR1P24814 1151 aa5.86□□□□□ -1.47
PRE3YJL001W YCL042WP25572 119 aa5.86□□□□□ -1.47
PRE3YJL001W BUD14P27637 709 aa5.86□□□□□ -1.47
PRE3YJL001W MUP3P38734 546 aa5.86□□□□□ -1.47
PRE3YJL001W VHR1P40522 640 aa5.86□□□□□ -1.47
PRE3YJL001W AZF1P41696 914 aa5.86□□□□□ -1.47
PRE3YJL001W BAP3P41815 604 aa5.86□□□□□ -1.47
PRE3YJL001W SAE2P46946 345 aa5.86□□□□□ -1.47
PRE3YJL001W BUD32P53323 261 aa5.86□□□□□ -1.47
PRE3YJL001W ASI2P53895 289 aa5.86□□□□□ -1.47
PRE3YJL001W RPL22BP56628 122 aaKnown RBP5.86□□□□□ -1.47
PRE3YJL001W UTP6Q02354 440 aaKnown RBP5.86□□□□□ -1.47
PRE3YJL001W ATG23Q06671 453 aa5.86□□□□□ -1.47
PRE3YJL001W YOL159CQ08300 171 aa5.86□□□□□ -1.47
PRE3YJL001W RRP42Q12277 265 aaPredicted RBP5.86□□□□□ -1.47
PRE3YJL001W PRP6P19735 899 aaPredicted RBP5.85□□□□□ -1.47
PRE3YJL001W NGG1P32494 702 aa5.85□□□□□ -1.47
PRE3YJL001W PET127P32606 800 aa5.85□□□□□ -1.47
PRE3YJL001W MIA40P36046 403 aa5.85□□□□□ -1.47
PRE3YJL001W GID8P40208 455 aa5.85□□□□□ -1.47
PRE3YJL001W CLD1P53264 445 aa5.85□□□□□ -1.47
PRE3YJL001W PRP38Q00723 242 aaPredicted RBP5.85□□□□□ -1.47
PRE3YJL001W URH1Q04179 340 aa5.85□□□□□ -1.47
PRE3YJL001W NOP12Q08208 459 aaKnown RBP5.85□□□□□ -1.47
PRE3YJL001W RGT2Q12300 763 aa5.85□□□□□ -1.47
PRE3YJL001W CMD1P06787 147 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W TRX2P22803 104 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W MGR1P25573 417 aa5.84□□□□□ -1.47
PRE3YJL001W TAH1P25638 111 aaPredicted RBP5.84□□□□□ -1.47
PRE3YJL001W ATG15P25641 520 aa5.84□□□□□ -1.47
PRE3YJL001W HXT4P32467 576 aa5.84□□□□□ -1.47
PRE3YJL001W PTM1P32857 523 aa5.84□□□□□ -1.47
PRE3YJL001W SDH3P33421 198 aa5.84□□□□□ -1.47
PRE3YJL001W MFT1P33441 392 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W NIC96P34077 839 aa5.84□□□□□ -1.47
PRE3YJL001W FAT1P38225 669 aa5.84□□□□□ -1.47
PRE3YJL001W MSS4P38994 779 aa5.84□□□□□ -1.47
PRE3YJL001W APQ12P40532 138 aa5.84□□□□□ -1.47
PRE3YJL001W ECL1P48235 211 aa5.84□□□□□ -1.47
PRE3YJL001W RNR4P49723 345 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W YDR209CQ03480 137 aa5.84□□□□□ -1.47
PRE3YJL001W YAP6Q03935 383 aa5.84□□□□□ -1.47
PRE3YJL001W ADE13Q05911 482 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W VAM6Q07468 1049 aa5.84□□□□□ -1.47
PRE3YJL001W ENT4Q07872 247 aa5.84□□□□□ -1.47
PRE3YJL001W UBX3Q12229 455 aa5.84□□□□□ -1.47
PRE3YJL001W PRS5Q12265 496 aaKnown RBP5.84□□□□□ -1.47
PRE3YJL001W NPC2Q12408 173 aa5.84□□□□□ -1.47
PRE3YJL001W BRR1Q99177 341 aaPredicted RBP5.84□□□□□ -1.47
PRE3YJL001W GPA2P10823 449 aa5.83□□□□□ -1.48
PRE3YJL001W GLK1P17709 500 aaKnown RBP5.83□□□□□ -1.48
PRE3YJL001W AAD3P25612 363 aa5.83□□□□□ -1.48
PRE3YJL001W YMC1P32331 307 aa5.83□□□□□ -1.48
PRE3YJL001W ERG1P32476 496 aaKnown RBP5.83□□□□□ -1.48
PRE3YJL001W MKK1P32490 508 aa5.83□□□□□ -1.48
PRE3YJL001W ATO2P32907 282 aa5.83□□□□□ -1.48
PRE3YJL001W SUI1P32911 108 aaKnown RBP5.83□□□□□ -1.48
PRE3YJL001W YKL100CP34248 587 aa5.83□□□□□ -1.48
PRE3YJL001W RMA1P36001 430 aaKnown RBP5.83□□□□□ -1.48
PRE3YJL001W EBP2P36049 427 aaKnown RBP5.83□□□□□ -1.48
PRE3YJL001W YBR139WP38109 508 aa5.83□□□□□ -1.48
PRE3YJL001W BIO3P50277 480 aa5.83□□□□□ -1.48
PRE3YJL001W MPS1P54199 764 aa5.83□□□□□ -1.48
PRE3YJL001W SLT2Q00772 484 aa5.83□□□□□ -1.48
PRE3YJL001W SML1Q04964 104 aa5.83□□□□□ -1.48
PRE3YJL001W YPS7Q06325 596 aa5.83□□□□□ -1.48
PRE3YJL001W CRN1Q06440 651 aa5.83□□□□□ -1.48
PRE3YJL001W YOR376WQ08900 122 aa5.83□□□□□ -1.48
PRE3YJL001W YPR011CQ12251 326 aa5.83□□□□□ -1.48
PRE3YJL001W SRN2Q99176 213 aa5.83□□□□□ -1.48
PRE3YJL001W YLR415CO13578 112 aa5.82□□□□□ -1.48
PRE3YJL001W SEC14P24280 304 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W RIM1P32445 135 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W CDC5P32562 705 aa5.82□□□□□ -1.48
PRE3YJL001W GCG1P32656 232 aaKnown RBP5.82□□□□□ -1.48
PRE3YJL001W CAJ1P39101 391 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms