RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	SEC66	P33754	206 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	YCR041W	P37265	110 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	PCA1	P38360	1216 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	KEL1	P38853	1164 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	AGX1	P43567	385 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	AIP1	P46680	615 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	GOR1	P53839	350 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	YDR387C	Q04162	555 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	ERB1	Q04660	807 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	SIL1	Q08199	421 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	HNT3	Q08702	217 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	RSA1	Q08932	381 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	SKS1	Q12505	502 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	YCL021W-A	Q96VH3	125 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	NIP1	P32497	812 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	LOS1	P33418	1100 aa	Predicted RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	LAS1	P36146	502 aa	Predicted RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	ARA1	P38115	344 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	SIF2	P38262	535 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	NAS2	P40555	220 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	MSO1	P53604	210 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	SLG1	P54867	378 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	OAZ1	Q02803	292 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	DBP9	Q06218	594 aa	Known RBP	2.8	□□□□□ -1.96
VHR1	YIL056W	ARV1	Q06541	321 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	REX4	Q08237	289 aa		2.8	□□□□□ -1.96
VHR1	YIL056W	SSE1	P32589	693 aa	Known RBP	2.79	□□□□□ -1.96
VHR1	YIL056W	STB6	P36085	766 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	PCH2	P38126	564 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	NTC20	P38302	140 aa	Predicted RBP	2.79	□□□□□ -1.96
VHR1	YIL056W	SPT8	P38915	602 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	FMS1	P50264	508 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	ART5	P53244	586 aa	Known RBP	2.79	□□□□□ -1.96
VHR1	YIL056W	TOF1	P53840	1238 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	EOS1	P53938	366 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	GYL1	Q04322	720 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	GRX6	Q12438	231 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	YOL159C-A	Q3E769	90 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	YLR278C	Q05854	1341 aa		2.79	□□□□□ -1.96
VHR1	YIL056W	OM45	P16547	393 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	MRPL25	P23369	157 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	CLB1	P24868	471 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.78	□□□□□ -1.96	not detected
VHR1	YIL056W	SWH1	P35845	1188 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	VPS45	P38932	577 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	SSU1	P41930	458 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	DLD2	P46681	530 aa	Known RBP	2.78	□□□□□ -1.96
VHR1	YIL056W	ECM27	P47144	725 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	SSN8	P47821	323 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	RAD17	P48581	401 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	NUP84	P52891	726 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	PRO2	P54885	456 aa	Known RBP	2.78	□□□□□ -1.96
VHR1	YIL056W	RRN5	Q02983	363 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	ODC1	Q03028	310 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	HSP31	Q04432	237 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	RRN11	Q04712	507 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	MDY2	Q12285	212 aa		2.78	□□□□□ -1.96
VHR1	YIL056W	HHF1	P02309	103 aa	Known RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	GPH1	P06738	902 aa	Known RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	HIP1	P06775	603 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	CLC1	P17891	233 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	HXT3	P32466	567 aa	Known RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	YBL059W	P34224	193 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	TIF5	P38431	405 aa	Known RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	OSW5	P40219	148 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	TFG2	P41896	400 aa	Predicted RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	YIP1	P53039	248 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	RRP45	Q05636	305 aa	Known RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	CLP1	Q08685	445 aa	Predicted RBP	2.78	□□□□□ -1.97
VHR1	YIL056W	YLR108C	Q12259	485 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	PSY3	Q12318	242 aa		2.78	□□□□□ -1.97
VHR1	YIL056W	YRF1-4	O13559	1382 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	DBP3	P20447	523 aa	Known RBP	2.77	□□□□□ -1.97
VHR1	YIL056W	YIM1	P28625	365 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	MSP1	P28737	362 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	YEL043W	P32618	956 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	SUR1	P33300	382 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	COY1	P34237	679 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	PIM1	P36775	1133 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	APE3	P37302	537 aa	Known RBP	2.77	□□□□□ -1.97
VHR1	YIL056W	RIB5	P38145	238 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	AVT5	P38176	459 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	CTM1	P38818	585 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	YIL067C	P40514	678 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	EFM4	P40516	257 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
VHR1	YIL056W	NCA3	P46955	337 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	YGL138C	P53122	345 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	RPN14	P53196	417 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	BOR1	P53838	576 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	TAP42	Q04372	366 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	MGR3	Q04472	501 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	DON1	Q05610	365 aa		2.77	□□□□□ -1.97
VHR1	YIL056W	THP3	Q12049	470 aa	Known RBP	2.77	□□□□□ -1.97
VHR1	YIL056W	PKH2	Q12236	1081 aa	Known RBP	2.77	□□□□□ -1.97
VHR1	YIL056W	HIS4	P00815	799 aa	Known RBP	2.76	□□□□□ -1.97
VHR1	YIL056W	PMR1	P13586	950 aa		2.76	□□□□□ -1.97
VHR1	YIL056W	NOP1	P15646	327 aa	Known RBP	2.76	□□□□□ -1.97
VHR1	YIL056W	MER1	P16523	270 aa		2.76	□□□□□ -1.97
VHR1	YIL056W	HEM15	P16622	393 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms