RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN10	YHR200W	ARP2	P32381	391 aa	Known RBP	13.21	□□□□□ -0.29
RPN10	YHR200W	CDC3	P32457	520 aa	Known RBP	13.21	□□□□□ -0.29
RPN10	YHR200W	ERG1	P32476	496 aa	Known RBP	13.21	□□□□□ -0.29
RPN10	YHR200W	HOG1	P32485	435 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	SKN1	P33336	771 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	MDJ1	P35191	511 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	OAR1	P35731	278 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	MNN2	P38069	597 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	TSL1	P38427	1098 aa	Known RBP	13.21	□□□□□ -0.29
RPN10	YHR200W	VHR1	P40522	640 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	NEO1	P40527	1151 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	13.21	□□□□□ -0.29	not detected
RPN10	YHR200W	ESF2	P53743	316 aa	Known RBP	13.21	□□□□□ -0.29
RPN10	YHR200W	HOT1	Q03213	719 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	PUN1	Q06991	263 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	YLR036C	Q07986	203 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	RRT8	Q08219	342 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	VIK1	Q12045	647 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	YPR064W	Q12492	139 aa		13.21	□□□□□ -0.29
RPN10	YHR200W	GPH1	P06738	902 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	SNF4	P12904	322 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	APE2	P32454	952 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	SFA1	P32771	386 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	FMP46	P36141	133 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	SCO2	P38072	301 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	SLM4	P38247	162 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	GPI8	P49018	411 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	SUN4	P53616	420 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	ASI2	P53895	289 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	OAZ1	Q02803	292 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	BNA5	Q05979	453 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	DBP9	Q06218	594 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	YPR097W	Q06839	1073 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	IRC13	Q08630	104 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	RTK1	Q12100	620 aa	Predicted RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	GLO4	Q12320	285 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	NSI1	Q12457	570 aa		13.2	□□□□□ -0.3
RPN10	YHR200W	PNO1	Q99216	274 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	BEM2	P39960	2167 aa	Known RBP	13.2	□□□□□ -0.3
RPN10	YHR200W	CAN1	P04817	590 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	YJU2	P28320	278 aa	Predicted RBP	13.19	□□□□□ -0.3
RPN10	YHR200W	RPC82	P32349	654 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	OMA1	P36163	345 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	RIB1	P38066	345 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	ELP2	P42935	788 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	HOC1	P47124	396 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	PAC10	P48363	199 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	ATP22	P50273	684 aa	Predicted RBP	13.19	□□□□□ -0.3
RPN10	YHR200W	ENT2	Q05785	613 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	YPR022C	Q12139	1133 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	YDL199C	Q12407	687 aa		13.19	□□□□□ -0.3
RPN10	YHR200W	ALG7	P07286	448 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	ATR1	P13090	542 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	DBP3	P20447	523 aa	Known RBP	13.18	□□□□□ -0.3
RPN10	YHR200W	PRO1	P32264	428 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	DOA1	P36037	715 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	BNA4	P38169	460 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	ATG14	P38270	344 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	STP2	P38704	541 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	PMT4	P46971	762 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	RRN5	Q02983	363 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	YDR239C	Q03780	787 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	TEN1	Q07921	160 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	SFM1	Q12314	213 aa		13.18	□□□□□ -0.3
RPN10	YHR200W	STT4	P37297	1900 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	SUI3	P09064	285 aa	Known RBP	13.17	□□□□□ -0.3
RPN10	YHR200W	MGR1	P25573	417 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	YCL049C	P25577	312 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	TPA1	P40032	644 aa	Known RBP	13.17	□□□□□ -0.3
RPN10	YHR200W	MRPS18	P42847	217 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	APC4	Q04601	652 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	ARR1	Q06596	294 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	RSA1	Q08932	381 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	YOR342C	Q12182	319 aa		13.17	□□□□□ -0.3
RPN10	YHR200W	WTM1	Q12363	437 aa	Known RBP	13.17	□□□□□ -0.3
RPN10	YHR200W	FAR1	P21268	830 aa		13.16	□□□□□ -0.3
RPN10	YHR200W	MSB1	P21339	1137 aa	Known RBP	13.16	□□□□□ -0.3
RPN10	YHR200W	MAP2	P38174	421 aa	Known RBP	13.16	□□□□□ -0.3
RPN10	YHR200W	FMP27	Q06179	2628 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	PUT2	P07275	575 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	AGP1	P25376	633 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	SUI1	P32911	108 aa	Known RBP	13.15	□□□□□ -0.3
RPN10	YHR200W	LTP1	P40347	161 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	YJL068C	P40363	299 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	LYS12	P40495	371 aa	Known RBP	13.15	□□□□□ -0.3
RPN10	YHR200W	ARF3	P40994	183 aa	RIP-Chip data	13.15	□□□□□ -0.3	not detected
RPN10	YHR200W	MRK1	P50873	501 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	YEH1	Q07804	573 aa		13.15	□□□□□ -0.3
RPN10	YHR200W	YAP1	P19880	650 aa	Known RBP	13.14	□□□□□ -0.31
RPN10	YHR200W	GRR1	P24814	1151 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	RNQ1	P25367	405 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	NTG1	P31378	399 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	PDS1	P40316	373 aa	Predicted RBP	13.14	□□□□□ -0.31
RPN10	YHR200W	IGO1	P53897	168 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	SPR6	Q01684	191 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	SPO19	Q03029	223 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	SPO77	Q06134	477 aa		13.14	□□□□□ -0.31
RPN10	YHR200W	PUS7	Q08647	676 aa	Known RBP	13.14	□□□□□ -0.31
RPN10	YHR200W	COR1	P07256	457 aa		13.13	□□□□□ -0.31
RPN10	YHR200W	MER1	P16523	270 aa		13.13	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms