RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W COS9P36034 407 aa3.44□□□□□ -1.86
CAF130YGR134W GMH1P36125 273 aa3.44□□□□□ -1.86
CAF130YGR134W URA8P38627 578 aaPredicted RBP3.44□□□□□ -1.86
CAF130YGR134W YHR045WP38775 560 aa3.44□□□□□ -1.86
CAF130YGR134W RCY1P39531 840 aa3.44□□□□□ -1.86
CAF130YGR134W ECM10P39987 644 aa3.44□□□□□ -1.86
CAF130YGR134W ATM1P40416 690 aa3.44□□□□□ -1.86
CAF130YGR134W PMT5P52867 743 aa3.44□□□□□ -1.86
CAF130YGR134W YIP5P53108 310 aa3.44□□□□□ -1.86
CAF130YGR134W MTQ1P53944 314 aa3.44□□□□□ -1.86
CAF130YGR134W RAX1Q08760 435 aa3.44□□□□□ -1.86
CAF130YGR134W SRO7Q12038 1033 aa3.44□□□□□ -1.86
CAF130YGR134W YDR262WQ12331 272 aa3.44□□□□□ -1.86
CAF130YGR134W PRP21P32524 280 aaPredicted RBP3.44□□□□□ -1.86
CAF130YGR134W YSC83P32792 385 aa3.44□□□□□ -1.86
CAF130YGR134W TAF14P35189 244 aa3.44□□□□□ -1.86
CAF130YGR134W RTT107P38850 1070 aa3.44□□□□□ -1.86
CAF130YGR134W PZF1P39933 429 aa3.44□□□□□ -1.86
CAF130YGR134W TMN3P40071 706 aa3.44□□□□□ -1.86
CAF130YGR134W DSN1P40568 576 aa3.44□□□□□ -1.86
CAF130YGR134W CDC1P40986 491 aa3.44□□□□□ -1.86
CAF130YGR134W SPG5P42933 373 aa3.44□□□□□ -1.86
CAF130YGR134W RMR1P53060 241 aa3.44□□□□□ -1.86
CAF130YGR134W ESBP6P53918 673 aa3.44□□□□□ -1.86
CAF130YGR134W IVY1Q04934 453 aa3.44□□□□□ -1.86
CAF130YGR134W DUS4Q06063 367 aa3.44□□□□□ -1.86
CAF130YGR134W YPL216WQ08964 1102 aa3.44□□□□□ -1.86
CAF130YGR134W ADH7P25377 361 aa3.43□□□□□ -1.86
CAF130YGR134W UBC6P33296 250 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W YPK3P38070 525 aa3.43□□□□□ -1.86
CAF130YGR134W KTR3P38130 404 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W PPS1P38148 807 aa3.43□□□□□ -1.86
CAF130YGR134W SPP381P38282 291 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W TSC10P38342 320 aa3.43□□□□□ -1.86
CAF130YGR134W RPS7BP48164 190 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W PYK2P52489 506 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W ARI1P53111 347 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W PUS2P53167 370 aa3.43□□□□□ -1.86
CAF130YGR134W TRM112P53738 135 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W GIM5Q04493 163 aa3.43□□□□□ -1.86
CAF130YGR134W YMR074CQ04773 145 aa3.43□□□□□ -1.86
CAF130YGR134W LEA1Q08963 238 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W LCB4Q12246 624 aa3.43□□□□□ -1.86
CAF130YGR134W MF(ALPHA)1P01149 165 aa3.43□□□□□ -1.86
CAF130YGR134W MET3P08536 511 aa3.43□□□□□ -1.86
CAF130YGR134W CDC15P27636 974 aa3.43□□□□□ -1.86
CAF130YGR134W ZUO1P32527 433 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W RAD23P32628 398 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W MTR2P34232 184 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W OPY1P38271 328 aa3.43□□□□□ -1.86
CAF130YGR134W TOM71P38825 639 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W YGR127WP53275 312 aa3.43□□□□□ -1.86
CAF130YGR134W CUS2P53830 285 aaPredicted RBP3.43□□□□□ -1.86
CAF130YGR134W IPI3P53877 555 aa3.43□□□□□ -1.86
CAF130YGR134W RLI1Q03195 608 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W VPS60Q03390 229 aa3.43□□□□□ -1.86
CAF130YGR134W COX20Q04935 205 aa3.43□□□□□ -1.86
CAF130YGR134W TPO1Q07824 586 aa3.43□□□□□ -1.86
CAF130YGR134W SDO1Q07953 250 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W ABP140Q08641 628 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W YOS9Q99220 542 aa3.43□□□□□ -1.86
CAF130YGR134W CHS1P08004 1131 aa3.43□□□□□ -1.86
CAF130YGR134W PEP5P12868 1029 aa3.43□□□□□ -1.86
CAF130YGR134W HXT2P23585 541 aa3.43□□□□□ -1.86
CAF130YGR134W GID7P25569 745 aa3.43□□□□□ -1.86
CAF130YGR134W EMP70P32802 667 aa3.43□□□□□ -1.86
CAF130YGR134W KDX1P36005 433 aa3.43□□□□□ -1.86
CAF130YGR134W MMS21P38632 267 aa3.43□□□□□ -1.86
CAF130YGR134W RPP1P38786 293 aa3.43□□□□□ -1.86
CAF130YGR134W SAM50P53969 484 aa3.43□□□□□ -1.86
CAF130YGR134W YDR109CQ04585 715 aa3.43□□□□□ -1.86
CAF130YGR134W RRP45Q05636 305 aaKnown RBP3.43□□□□□ -1.86
CAF130YGR134W ARR2Q06597 130 aa3.43□□□□□ -1.86
CAF130YGR134W YOR365CQ08844 703 aa3.43□□□□□ -1.86
CAF130YGR134W INP53Q12271 1107 aa3.43□□□□□ -1.86
CAF130YGR134W EDE1P34216 1381 aa3.43□□□□□ -1.86
CAF130YGR134W ADH2P00331 348 aaKnown RBP3.42□□□□□ -1.86
CAF130YGR134W CHO2P05374 869 aaKnown RBP3.42□□□□□ -1.86
CAF130YGR134W NFT1P0CE68 1218 aa3.42□□□□□ -1.86
CAF130YGR134W MATALPHA1P0CY06 175 aa3.42□□□□□ -1.86
CAF130YGR134W HMLALPHA1P0CY07 175 aa3.42□□□□□ -1.86
CAF130YGR134W SEC12P11655 471 aa3.42□□□□□ -1.86
CAF130YGR134W CDC23P16522 626 aa3.42□□□□□ -1.86
CAF130YGR134W CKA2P19454 339 aa3.42□□□□□ -1.86
CAF130YGR134W MSB1P21339 1137 aaKnown RBP3.42□□□□□ -1.86
CAF130YGR134W YCR016WP25617 290 aaKnown RBP3.42□□□□□ -1.86
CAF130YGR134W MBB1P39534 108 aa3.42□□□□□ -1.86
CAF130YGR134W GAT2P40209 560 aa3.42□□□□□ -1.86
CAF130YGR134W DPB11P47027 764 aaPredicted RBP3.42□□□□□ -1.86
CAF130YGR134W NOP13P53883 403 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
CAF130YGR134W ATC1Q04005 294 aa3.42□□□□□ -1.86
CAF130YGR134W YMR130WQ04223 302 aa3.42□□□□□ -1.86
CAF130YGR134W GAS5Q08193 484 aa3.42□□□□□ -1.86
CAF130YGR134W GPA1P08539 472 aa3.42□□□□□ -1.86
CAF130YGR134W PMI40P29952 429 aaKnown RBP3.42□□□□□ -1.86
CAF130YGR134W YKL162CP36052 402 aa3.42□□□□□ -1.86
CAF130YGR134W YHR182WP38870 785 aa3.42□□□□□ -1.86
CAF130YGR134W IDS2P46958 469 aa3.42□□□□□ -1.86
CAF130YGR134W LOH1P47055 219 aa3.42□□□□□ -1.86
CAF130YGR134W RET3P53600 189 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms