RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W NCB2Q92317 146 aa3.23□□□□□ -1.89
LIF1YGL090W CAR1P00812 333 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W LEU4P06208 619 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W PDE2P06776 526 aa3.22□□□□□ -1.89
LIF1YGL090W RAD7P06779 565 aa3.22□□□□□ -1.89
LIF1YGL090W MSF1P08425 469 aa3.22□□□□□ -1.89
LIF1YGL090W RAP1P11938 827 aa3.22□□□□□ -1.89
LIF1YGL090W CKA2P19454 339 aa3.22□□□□□ -1.89
LIF1YGL090W MBR1P23493 339 aa3.22□□□□□ -1.89
LIF1YGL090W URK1P27515 501 aa3.22□□□□□ -1.89
LIF1YGL090W PRO3P32263 286 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W PTK1P36002 662 aaPredicted RBP3.22□□□□□ -1.89
LIF1YGL090W HOT13P36078 116 aa3.22□□□□□ -1.89
LIF1YGL090W YKL071WP36086 256 aa3.22□□□□□ -1.89
LIF1YGL090W OLA1P38219 394 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W ZTA1P38230 334 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W DIA4P38705 446 aaPredicted RBP3.22□□□□□ -1.89
LIF1YGL090W RFC4P40339 323 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W DSN1P40568 576 aa3.22□□□□□ -1.89
LIF1YGL090W IDS2P46958 469 aa3.22□□□□□ -1.89
LIF1YGL090W ABM1P47146 123 aa3.22□□□□□ -1.89
LIF1YGL090W IMD4P50094 524 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W RIB4P50861 169 aaPredicted RBP3.22□□□□□ -1.89
LIF1YGL090W YGL185CP53100 379 aa3.22□□□□□ -1.89
LIF1YGL090W YGL036WP53185 909 aaPredicted RBP3.22□□□□□ -1.89
LIF1YGL090W DBP6P53734 629 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W CUS2P53830 285 aaPredicted RBP3.22□□□□□ -1.89
LIF1YGL090W RSM28Q03430 361 aa3.22□□□□□ -1.89
LIF1YGL090W SPC2Q04969 178 aa3.22□□□□□ -1.89
LIF1YGL090W DCS1Q06151 350 aa3.22□□□□□ -1.89
LIF1YGL090W IZH3Q07959 543 aa3.22□□□□□ -1.89
LIF1YGL090W NRT1Q08485 598 aa3.22□□□□□ -1.89
LIF1YGL090W ABP140Q08641 628 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W DSE3Q08729 430 aa3.22□□□□□ -1.89
LIF1YGL090W RIO1Q12196 484 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W RLM1Q12224 676 aa3.22□□□□□ -1.89
LIF1YGL090W RUP1Q12242 671 aa3.22□□□□□ -1.89
LIF1YGL090W FMP16Q12497 93 aa3.22□□□□□ -1.89
LIF1YGL090W AI5_ALPHAQ9ZZX1 630 aa3.22□□□□□ -1.89
LIF1YGL090W CFT1Q06632 1357 aaKnown RBP3.22□□□□□ -1.89
LIF1YGL090W TDH2P00358 332 aaKnown RBP3.21□□□□□ -1.9
LIF1YGL090W TDH3P00359 332 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
LIF1YGL090W SPS4P09937 338 aa3.21□□□□□ -1.9
LIF1YGL090W SEN2P16658 377 aa3.21□□□□□ -1.9
LIF1YGL090W VPS33P20795 691 aa3.21□□□□□ -1.9
LIF1YGL090W SAG1P20840 650 aa3.21□□□□□ -1.9
LIF1YGL090W PDE1P22434 369 aa3.21□□□□□ -1.9
LIF1YGL090W DPB2P24482 689 aaPredicted RBP3.21□□□□□ -1.9
LIF1YGL090W DAL2P25335 343 aa3.21□□□□□ -1.9
LIF1YGL090W BEM1P29366 551 aa3.21□□□□□ -1.9
LIF1YGL090W ATP7P30902 174 aa3.21□□□□□ -1.9
LIF1YGL090W SPR1P32603 445 aa3.21□□□□□ -1.9
LIF1YGL090W UBC6P33296 250 aaPredicted RBP3.21□□□□□ -1.9
LIF1YGL090W YPT52P36018 234 aaKnown RBP3.21□□□□□ -1.9
LIF1YGL090W ARA1P38115 344 aa3.21□□□□□ -1.9
LIF1YGL090W YJL193WP39542 402 aa3.21□□□□□ -1.9
LIF1YGL090W YMR147WP40218 223 aaKnown RBP3.21□□□□□ -1.9
LIF1YGL090W MAF1P41910 395 aa3.21□□□□□ -1.9
LIF1YGL090W RPN11P43588 306 aaKnown RBP3.21□□□□□ -1.9
LIF1YGL090W SCD6P45978 349 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
LIF1YGL090W YAR1P46683 200 aa3.21□□□□□ -1.9
LIF1YGL090W BIO3P50277 480 aa3.21□□□□□ -1.9
LIF1YGL090W LSG1P53145 640 aaKnown RBP3.21□□□□□ -1.9
LIF1YGL090W SSU72P53538 206 aaPredicted RBP3.21□□□□□ -1.9
LIF1YGL090W YNL181WP53878 407 aa3.21□□□□□ -1.9
LIF1YGL090W EFM6P53970 246 aa3.21□□□□□ -1.9
LIF1YGL090W WAR1Q03631 944 aa3.21□□□□□ -1.9
LIF1YGL090W CAB5Q03941 241 aa3.21□□□□□ -1.9
LIF1YGL090W ECM11Q04110 302 aa3.21□□□□□ -1.9
LIF1YGL090W SEC10Q06245 871 aa3.21□□□□□ -1.9
LIF1YGL090W GRS2Q06817 618 aa3.21□□□□□ -1.9
LIF1YGL090W GPN2Q08726 347 aaPredicted RBP3.21□□□□□ -1.9
LIF1YGL090W BAG7Q12128 409 aa3.21□□□□□ -1.9
LIF1YGL090W TEF1P02994 458 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W GPH1P06738 902 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W PET494P07390 489 aaPredicted RBP3.2□□□□□ -1.9
LIF1YGL090W YML003WP0CF16 290 aa3.2□□□□□ -1.9
LIF1YGL090W NHP6BP11633 99 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W TCP1P12612 559 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W STE4P18851 423 aa3.2□□□□□ -1.9
LIF1YGL090W COQ1P18900 473 aa3.2□□□□□ -1.9
LIF1YGL090W ZRC1P20107 442 aa3.2□□□□□ -1.9
LIF1YGL090W KGD1P20967 1014 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W SEC62P21825 274 aa3.2□□□□□ -1.9
LIF1YGL090W RBK1P25332 333 aa3.2□□□□□ -1.9
LIF1YGL090W RHB1P25378 209 aa3.2□□□□□ -1.9
LIF1YGL090W PBN1P25580 416 aa3.2□□□□□ -1.9
LIF1YGL090W PRE2P30656 287 aaKnown RBP3.2□□□□□ -1.9
LIF1YGL090W GSH1P32477 678 aa3.2□□□□□ -1.9
LIF1YGL090W SIP1P32578 815 aa3.2□□□□□ -1.9
LIF1YGL090W REC114P32841 428 aa3.2□□□□□ -1.9
LIF1YGL090W RPC25P35718 212 aa3.2□□□□□ -1.9
LIF1YGL090W ERG7P38604 731 aa3.2□□□□□ -1.9
LIF1YGL090W UIP3P39547 235 aa3.2□□□□□ -1.9
LIF1YGL090W PRM9P39551 298 aa3.2□□□□□ -1.9
LIF1YGL090W YER130CP39959 443 aa3.2□□□□□ -1.9
LIF1YGL090W DIA3P52290 468 aa3.2□□□□□ -1.9
LIF1YGL090W YGL117WP53133 265 aa3.2□□□□□ -1.9
LIF1YGL090W YGR117CP53270 476 aa3.2□□□□□ -1.9
LIF1YGL090W YGR127WP53275 312 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms