RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W VPS71Q03433 280 aa4.27□□□□□ -1.73
SPT3YDR392W YLR297WQ05899 129 aa4.27□□□□□ -1.73
SPT3YDR392W GRS2Q06817 618 aa4.27□□□□□ -1.73
SPT3YDR392W YOR114WQ12219 294 aa4.27□□□□□ -1.73
SPT3YDR392W PAR32Q12515 295 aaKnown RBP4.27□□□□□ -1.73
SPT3YDR392W MDM12Q92328 271 aa4.27□□□□□ -1.73
SPT3YDR392W CTA1P15202 515 aa4.26□□□□□ -1.73
SPT3YDR392W PRP16P15938 1071 aaPredicted RBP4.26□□□□□ -1.73
SPT3YDR392W FEN2P25621 512 aaKnown RBP4.26□□□□□ -1.73
SPT3YDR392W SKT5P34226 696 aa4.26□□□□□ -1.73
SPT3YDR392W PRY2P36110 329 aa4.26□□□□□ -1.73
SPT3YDR392W GRE3P38715 327 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SPT3YDR392W YEL028WP39989 153 aa4.26□□□□□ -1.73
SPT3YDR392W PKP1P40530 394 aa4.26□□□□□ -1.73
SPT3YDR392W MPS3P47069 682 aa4.26□□□□□ -1.73
SPT3YDR392W PRM15Q03262 622 aa4.26□□□□□ -1.73
SPT3YDR392W NKP2Q06162 153 aa4.26□□□□□ -1.73
SPT3YDR392W CDC45Q08032 650 aa4.26□□□□□ -1.73
SPT3YDR392W SFG1Q12507 346 aa4.26□□□□□ -1.73
SPT3YDR392W VPS5Q92331 675 aa4.26□□□□□ -1.73
SPT3YDR392W QCR6P00127 147 aa4.25□□□□□ -1.73
SPT3YDR392W CHA1P25379 360 aaKnown RBP4.25□□□□□ -1.73
SPT3YDR392W RPF2P36160 344 aaKnown RBP4.25□□□□□ -1.73
SPT3YDR392W PTH1P38876 190 aaKnown RBP4.25□□□□□ -1.73
SPT3YDR392W YNL195CP40168 261 aa4.25□□□□□ -1.73
SPT3YDR392W CCT5P40413 562 aaKnown RBP4.25□□□□□ -1.73
SPT3YDR392W YIL169CP40442 995 aa4.25□□□□□ -1.73
SPT3YDR392W ICE2P40499 491 aa4.25□□□□□ -1.73
SPT3YDR392W TAX4P47030 604 aa4.25□□□□□ -1.73
SPT3YDR392W ARP5P53946 755 aa4.25□□□□□ -1.73
SPT3YDR392W GIP3Q03016 1276 aa4.25□□□□□ -1.73
SPT3YDR392W CGI121Q03705 181 aaKnown RBP4.25□□□□□ -1.73
SPT3YDR392W HFD1Q04458 532 aa4.25□□□□□ -1.73
SPT3YDR392W SWC7Q06707 132 aa4.25□□□□□ -1.73
SPT3YDR392W OCA6Q12454 224 aa4.25□□□□□ -1.73
SPT3YDR392W MTR10Q99189 972 aa4.25□□□□□ -1.73
SPT3YDR392W TPK2P06245 380 aa4.24□□□□□ -1.73
SPT3YDR392W GAL3P13045 520 aa4.24□□□□□ -1.73
SPT3YDR392W CMK1P27466 446 aaKnown RBP4.24□□□□□ -1.73
SPT3YDR392W CSG2P35206 410 aa4.24□□□□□ -1.73
SPT3YDR392W YER189WP40104 122 aa4.24□□□□□ -1.73
SPT3YDR392W PMT6P42934 759 aa4.24□□□□□ -1.73
SPT3YDR392W STB2P46679 850 aa4.24□□□□□ -1.73
SPT3YDR392W EMC2P47133 292 aaKnown RBP4.24□□□□□ -1.73
SPT3YDR392W TCB2P48231 1178 aa4.24□□□□□ -1.73
SPT3YDR392W ERG26P53199 349 aaKnown RBP4.24□□□□□ -1.73
SPT3YDR392W SKI8Q02793 397 aaPredicted RBP4.24□□□□□ -1.73
SPT3YDR392W NGL2Q03264 515 aaKnown RBP4.24□□□□□ -1.73
SPT3YDR392W HRI1Q05905 244 aaKnown RBP4.24□□□□□ -1.73
SPT3YDR392W LDB18Q07887 179 aa4.24□□□□□ -1.73
SPT3YDR392W YOL159CQ08300 171 aa4.24□□□□□ -1.73
SPT3YDR392W DCS2Q12123 353 aa4.24□□□□□ -1.73
SPT3YDR392W RKI1Q12189 258 aa4.24□□□□□ -1.73
SPT3YDR392W POM34Q12445 299 aa4.24□□□□□ -1.73
SPT3YDR392W FOL3Q12676 427 aaPredicted RBP4.24□□□□□ -1.73
SPT3YDR392W HSP82P02829 709 aaKnown RBP4.23□□□□□ -1.73
SPT3YDR392W HEM4P06174 275 aa4.23□□□□□ -1.73
SPT3YDR392W BIK1P11709 440 aa4.23□□□□□ -1.73
SPT3YDR392W DAL2P25335 343 aa4.23□□□□□ -1.73
SPT3YDR392W YHR045WP38775 560 aa4.23□□□□□ -1.73
SPT3YDR392W FRT2P39734 528 aa4.23□□□□□ -1.73
SPT3YDR392W AGE2P40529 298 aa4.23□□□□□ -1.73
SPT3YDR392W YIR020CP40575 100 aa4.23□□□□□ -1.73
SPT3YDR392W SNO3P43544 222 aa4.23□□□□□ -1.73
SPT3YDR392W ATG36P46983 293 aa4.23□□□□□ -1.73
SPT3YDR392W RFX1P48743 811 aa4.23□□□□□ -1.73
SPT3YDR392W YGR079WP53249 370 aa4.23□□□□□ -1.73
SPT3YDR392W API2Q04413 109 aa4.23□□□□□ -1.73
SPT3YDR392W RDL1Q12305 139 aaKnown RBP4.23□□□□□ -1.73
SPT3YDR392W YER190C-BP0CX94 160 aa4.22□□□□□ -1.73
SPT3YDR392W YEL077W-AP0CX95 160 aa4.22□□□□□ -1.73
SPT3YDR392W YGR296C-BP0CX96 160 aa4.22□□□□□ -1.73
SPT3YDR392W YPL283W-BP0CX97 160 aa4.22□□□□□ -1.73
SPT3YDR392W YPR204C-AP0CX98 160 aa4.22□□□□□ -1.73
SPT3YDR392W YFL068WP0CX99 160 aa4.22□□□□□ -1.73
SPT3YDR392W YLL066W-AP0CY00 160 aa4.22□□□□□ -1.73
SPT3YDR392W YLL067W-AP0CY01 160 aa4.22□□□□□ -1.73
SPT3YDR392W RNA1P11745 407 aaKnown RBP4.22□□□□□ -1.73
SPT3YDR392W PUT4P15380 627 aa4.22□□□□□ -1.73
SPT3YDR392W MGR1P25573 417 aa4.22□□□□□ -1.73
SPT3YDR392W MTC7P32633 139 aa4.22□□□□□ -1.73
SPT3YDR392W KKQ8P36004 724 aa4.22□□□□□ -1.73
SPT3YDR392W AYR1P40471 297 aa4.22□□□□□ -1.73
SPT3YDR392W TES1P41903 349 aaKnown RBP4.22□□□□□ -1.73
SPT3YDR392W COS12P53053 380 aa4.22□□□□□ -1.73
SPT3YDR392W STR3P53101 465 aaKnown RBP4.22□□□□□ -1.73
SPT3YDR392W HST1P53685 503 aa4.22□□□□□ -1.73
SPT3YDR392W RNY1Q02933 434 aaKnown RBP4.22□□□□□ -1.73
SPT3YDR392W PRP3Q03338 469 aaPredicted RBP4.22□□□□□ -1.73
SPT3YDR392W YDR179W-AQ03983 463 aa4.22□□□□□ -1.73
SPT3YDR392W COG8Q04632 607 aa4.22□□□□□ -1.73
SPT3YDR392W ERG20P08524 352 aaKnown RBP4.21□□□□□ -1.74
SPT3YDR392W ERR1P0CX10 437 aa4.21□□□□□ -1.74
SPT3YDR392W ERR2P0CX11 437 aa4.21□□□□□ -1.74
SPT3YDR392W NCP1P16603 691 aaKnown RBP4.21□□□□□ -1.74
SPT3YDR392W RPO26P20435 155 aa4.21□□□□□ -1.74
SPT3YDR392W PRE2P30656 287 aaKnown RBP4.21□□□□□ -1.74
SPT3YDR392W MGM101P32787 269 aaKnown RBP4.21□□□□□ -1.74
SPT3YDR392W PRP18P33411 251 aaPredicted RBP4.21□□□□□ -1.74
SPT3YDR392W YNK1P36010 153 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms