RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W ELO3P40319 345 aa2.03□□□□□ -2.08
SIR4YDR227W SLX9P53251 210 aaPredicted RBP2.03□□□□□ -2.08
SIR4YDR227W COP1P53622 1201 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W YPL014WQ02606 381 aa2.03□□□□□ -2.08
SIR4YDR227W DIC1Q06143 298 aa2.03□□□□□ -2.08
SIR4YDR227W ETT1Q08421 412 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W MTR10Q99189 972 aa2.03□□□□□ -2.08
SIR4YDR227W COQ4O13525 335 aa2.03□□□□□ -2.08
SIR4YDR227W SEM1O94742 89 aa2.03□□□□□ -2.08
SIR4YDR227W GPM1P00950 247 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W RPB2P08518 1224 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W PEX1P24004 1043 aa2.03□□□□□ -2.08
SIR4YDR227W GEX1P25596 615 aa2.03□□□□□ -2.08
SIR4YDR227W PRE4P30657 266 aa2.03□□□□□ -2.08
SIR4YDR227W RRM3P38766 723 aa2.03□□□□□ -2.08
SIR4YDR227W SEC31P38968 1273 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W HXT13P39924 564 aa2.03□□□□□ -2.08
SIR4YDR227W SLT2Q00772 484 aa2.03□□□□□ -2.08
SIR4YDR227W ARG5,6Q01217 863 aa2.03□□□□□ -2.08
SIR4YDR227W DCS1Q06151 350 aa2.03□□□□□ -2.08
SIR4YDR227W YLR173WQ06247 608 aa2.03□□□□□ -2.08
SIR4YDR227W ATG29Q12092 213 aa2.03□□□□□ -2.08
SIR4YDR227W GNT1Q12096 491 aa2.03□□□□□ -2.08
SIR4YDR227W URA3P03962 267 aa2.02□□□□□ -2.09
SIR4YDR227W COQ1P18900 473 aa2.02□□□□□ -2.09
SIR4YDR227W EFB1P32471 206 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W YOX1P34161 385 aa2.02□□□□□ -2.09
SIR4YDR227W YKL063CP35725 167 aa2.02□□□□□ -2.09
SIR4YDR227W APT2P36973 181 aa2.02□□□□□ -2.09
SIR4YDR227W FET3P38993 636 aa2.02□□□□□ -2.09
SIR4YDR227W SAM50P53969 484 aa2.02□□□□□ -2.09
SIR4YDR227W SPC2Q04969 178 aa2.02□□□□□ -2.09
SIR4YDR227W YDR278CQ05612 105 aa2.02□□□□□ -2.09
SIR4YDR227W FUS2Q05670 677 aa2.02□□□□□ -2.09
SIR4YDR227W RIO1Q12196 484 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W ILV5P06168 395 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W RPL11AP0C0W9 174 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W ISY1P21374 235 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W SLM5P25345 492 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W VID24P38263 362 aa2.02□□□□□ -2.09
SIR4YDR227W ARO9P38840 513 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W PLB1P39105 664 aa2.02□□□□□ -2.09
SIR4YDR227W YIA6P40556 373 aa2.02□□□□□ -2.09
SIR4YDR227W HXT14P42833 540 aa2.02□□□□□ -2.09
SIR4YDR227W DIA3P52290 468 aa2.02□□□□□ -2.09
SIR4YDR227W NMA2P53204 395 aa2.02□□□□□ -2.09
SIR4YDR227W SSU72P53538 206 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W YIF1P53845 314 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W NUP116Q02630 1113 aa2.02□□□□□ -2.09
SIR4YDR227W YMR279CQ03263 540 aa2.02□□□□□ -2.09
SIR4YDR227W CAB5Q03941 241 aa2.02□□□□□ -2.09
SIR4YDR227W DIA2Q08496 732 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W YOR365CQ08844 703 aa2.02□□□□□ -2.09
SIR4YDR227W NMD4Q12129 218 aa2.02□□□□□ -2.09
SIR4YDR227W LEU9Q12166 604 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W RRP12Q12754 1228 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W RPL11BQ3E757 174 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W ASP3-2P0CX77 362 aa2.02□□□□□ -2.09
SIR4YDR227W ASP3-3P0CX78 362 aa2.02□□□□□ -2.09
SIR4YDR227W ASP3-4P0CX79 362 aa2.02□□□□□ -2.09
SIR4YDR227W ASP3-1P0CZ17 362 aa2.02□□□□□ -2.09
SIR4YDR227W RFA2P26754 273 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W INO2P26798 304 aa2.02□□□□□ -2.09
SIR4YDR227W CRM1P30822 1084 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W GSP1P32835 219 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W GSP2P32836 220 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W HIS7P33734 552 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W HXT6P39003 570 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W HXT7P39004 570 aa2.02□□□□□ -2.09
SIR4YDR227W ELO1P39540 310 aa2.02□□□□□ -2.09
SIR4YDR227W SOP4P39543 234 aaPredicted RBP2.02□□□□□ -2.09
SIR4YDR227W YIL165CP40446 119 aa2.02□□□□□ -2.09
SIR4YDR227W BIT61P47041 543 aa2.02□□□□□ -2.09
SIR4YDR227W ARI1P53111 347 aaKnown RBP2.02□□□□□ -2.09
SIR4YDR227W SNF12P53628 566 aa2.02□□□□□ -2.09
SIR4YDR227W MFM1Q02783 413 aa2.02□□□□□ -2.09
SIR4YDR227W KAP120Q02932 1032 aa2.02□□□□□ -2.09
SIR4YDR227W TY1A-BLQ12266 440 aa2.02□□□□□ -2.09
SIR4YDR227W TFC7Q12415 435 aa2.02□□□□□ -2.09
SIR4YDR227W YDR461C-AQ2V2P7 80 aa2.02□□□□□ -2.09
SIR4YDR227W RPS14AP06367 137 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W ERG9P29704 444 aa2.01□□□□□ -2.09
SIR4YDR227W PRE2P30656 287 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W IMP3P32899 183 aaPredicted RBP2.01□□□□□ -2.09
SIR4YDR227W SGE1P33335 543 aa2.01□□□□□ -2.09
SIR4YDR227W YKL070WP36087 169 aa2.01□□□□□ -2.09
SIR4YDR227W ROT2P38138 954 aa2.01□□□□□ -2.09
SIR4YDR227W SRP68P38687 599 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W SMF2P38778 549 aa2.01□□□□□ -2.09
SIR4YDR227W RPS14BP39516 138 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W MRX1P40050 688 aa2.01□□□□□ -2.09
SIR4YDR227W YNL194CP40169 301 aa2.01□□□□□ -2.09
SIR4YDR227W LOC1P43586 204 aaPredicted RBP2.01□□□□□ -2.09
SIR4YDR227W ASN1P49089 572 aaKnown RBP2.01□□□□□ -2.09
SIR4YDR227W SPT20P50875 604 aa2.01□□□□□ -2.09
SIR4YDR227W SHY1P53266 389 aa2.01□□□□□ -2.09
SIR4YDR227W MPS1P54199 764 aa2.01□□□□□ -2.09
SIR4YDR227W TDA1Q03533 586 aa2.01□□□□□ -2.09
SIR4YDR227W CIA1Q05583 330 aa2.01□□□□□ -2.09
SIR4YDR227W MDM30Q05930 598 aa2.01□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms