RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	SKG3	Q06315	1026 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	CDD1	Q06549	142 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	GUD1	Q07729	489 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	INP54	Q08227	384 aa	Known RBP	4.91	□□□□□ -1.62
TUP1	YCR084C	BDS1	Q08347	646 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	YLR053C	Q12026	108 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	SFG1	Q12507	346 aa		4.91	□□□□□ -1.62
TUP1	YCR084C	DST1	P07273	309 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	PCK1	P10963	549 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	HEM13	P11353	328 aa	Known RBP	4.9	□□□□□ -1.62
TUP1	YCR084C	ATP12	P22135	325 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	PRE8	P23639	250 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	IFM1	P25038	676 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	FAA1	P30624	700 aa	Known RBP	4.9	□□□□□ -1.62
TUP1	YCR084C	MET28	P40573	187 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	OYE3	P41816	400 aa	Predicted RBP	4.9	□□□□□ -1.62
TUP1	YCR084C	SHR5	P41912	237 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	MSE1	P48525	536 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	YGL204C	P53089	101 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	NMA2	P53204	395 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	BUD17	P53727	317 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	ZRG17	P53735	605 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	ORC4	P54791	529 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	NGL2	Q03264	515 aa	Known RBP	4.9	□□□□□ -1.62
TUP1	YCR084C	YMR027W	Q04371	470 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	ROY1	Q04847	553 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	ASA1	Q06822	443 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	YPL272C	Q08984	517 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	RCN2	Q12044	265 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	KCS1	Q12494	1050 aa		4.9	□□□□□ -1.62
TUP1	YCR084C	HMG2	P12684	1045 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	MRP13	P12686	339 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	STF2	P16965	84 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	GAP1	P19145	602 aa	Predicted RBP	4.9	□□□□□ -1.63
TUP1	YCR084C	AMD2	P22580	549 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	RBK1	P25332	333 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	PER1	P25625	357 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	PRR1	P28708	518 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	CCR4	P31384	837 aa	Known RBP	4.9	□□□□□ -1.63
TUP1	YCR084C	TFC1	P32367	649 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	YGL015C	P33199	130 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	YOX1	P34161	385 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	AIM29	P36154	155 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	RFS1	P38234	210 aa	Known RBP	4.9	□□□□□ -1.63
TUP1	YCR084C	GOS1	P38736	223 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	FET3	P38993	636 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	VMA7	P39111	118 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	SEO1	P39709	593 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	CLA4	P48562	842 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	YGL159W	P53110	370 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	DBP6	P53734	629 aa	Known RBP	4.9	□□□□□ -1.63
TUP1	YCR084C	HXT15	P54854	567 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	ROD1	Q02805	837 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	SWF1	Q04629	336 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	COQ9	Q05779	260 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	YLR283W	Q05867	314 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	YEH1	Q07804	573 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	AKR2	Q12013	749 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	NMD4	Q12129	218 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	TIF6	Q12522	245 aa	Known RBP	4.9	□□□□□ -1.63
TUP1	YCR084C	YCL012C	Q8J0M4	134 aa		4.9	□□□□□ -1.63
TUP1	YCR084C	TDH2	P00358	332 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
TUP1	YCR084C	TUB3	P09734	445 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	SNF6	P18888	332 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	RNR3	P21672	869 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	MEK1	P24719	497 aa	Predicted RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	PBN1	P25580	416 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	IMP3	P32899	183 aa	Predicted RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	SIP2	P34164	415 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	YHR202W	P38887	602 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	RFC4	P40339	323 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	COS4	P43542	379 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	YJL181W	P46987	611 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	BIR1	P47134	954 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	DIE2	P50076	525 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	YGR126W	P53274	230 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	YIP3	P53633	176 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	AQR1	P53943	586 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	RPS15	Q01855	142 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	YSA1	Q01976	231 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	FRK1	Q03002	865 aa	Predicted RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	SSY1	Q03770	852 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	BNA7	Q04066	261 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	PEX10	Q05568	337 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	ADY4	Q05955	493 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	MHR1	Q06630	226 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	UAF30	Q08747	228 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	RAX1	Q08760	435 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	PNO1	Q99216	274 aa	Known RBP	4.89	□□□□□ -1.63
TUP1	YCR084C	AI5_ALPHA	Q9ZZX1	630 aa		4.89	□□□□□ -1.63
TUP1	YCR084C	IPP1	P00817	287 aa	Known RBP	4.88	□□□□□ -1.63
TUP1	YCR084C	GPM1	P00950	247 aa	Known RBP	4.88	□□□□□ -1.63
TUP1	YCR084C	CDC23	P16522	626 aa		4.88	□□□□□ -1.63
TUP1	YCR084C	UBC8	P28263	218 aa		4.88	□□□□□ -1.63
TUP1	YCR084C	SPS19	P32573	292 aa	Known RBP	4.88	□□□□□ -1.63
TUP1	YCR084C	SUI1	P32911	108 aa	Known RBP	4.88	□□□□□ -1.63
TUP1	YCR084C	UTP30	P36144	274 aa	Known RBP	4.88	□□□□□ -1.63
TUP1	YCR084C	NAT2	P37293	288 aa		4.88	□□□□□ -1.63
TUP1	YCR084C	GLY1	P37303	387 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms