RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 FTCDO95954 541 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 CCNE1P24864 410 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 RAB27AP51159 221 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 RPS6KA3P51812 740 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
LINC02228-204ENST00000642115 TAX1BP1Q86VP1 789 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 KANSL2Q9H9L4 492 aa17.25■□□□□ 0.35
LINC02228-204ENST00000642115 CCT8L1PA6NM43 557 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 LRRC53A6NM62 1247 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 DCDC2CA8MYV0 355 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 CCNT1O60563 726 aaKnown RBP17.24■□□□□ 0.35
LINC02228-204ENST00000642115 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 TRIM37O94972 964 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 CALML3P27482 149 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
LINC02228-204ENST00000642115 TAF1DQ9H5J8 278 aaPredicted RBP17.24■□□□□ 0.35
LINC02228-204ENST00000642115 DRD4P21917 467 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 HSD17B3P37058 310 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 HSPA9P38646 679 aaKnown RBP17.24■□□□□ 0.35
LINC02228-204ENST00000642115 TFAP4Q01664 338 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 LRRC41Q15345 812 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 MIIPQ5JXC2 388 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 MCM9Q9NXL9 1143 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 PCDHA4Q9UN74 947 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 STX8Q9UNK0 236 aa17.24■□□□□ 0.35
LINC02228-204ENST00000642115 NIP7Q9Y221 180 aaKnown RBP eCLIP17.24■□□□□ 0.35
LINC02228-204ENST00000642115 LRP6O75581 1613 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 H0YGN5 161 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 CFAP221Q4G0U5 840 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 WHAMMQ8TF30 809 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 ITFG2Q969R8 447 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 PLCB1Q9NQ66 1216 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
LINC02228-204ENST00000642115 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 ANAPC4Q9UJX5 808 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 NFS1Q9Y697 457 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 MYH6P13533 1939 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 SLC1A4P43007 532 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 PPP2R2AP63151 447 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 ZNF844Q08AG5 666 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 ARMC3Q5W041 872 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 KLHL7Q8IXQ5 586 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 P3H4Q92791 437 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 DHTKD1Q96HY7 919 aaPredicted RBP17.23■□□□□ 0.35
LINC02228-204ENST00000642115 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.23■□□□□ 0.35
LINC02228-204ENST00000642115 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
LINC02228-204ENST00000642115 CORO1CQ9ULV4 474 aaPredicted RBP17.23■□□□□ 0.35
LINC02228-204ENST00000642115 NOVA2Q9UNW9 492 aaKnown RBP17.23■□□□□ 0.35
LINC02228-204ENST00000642115 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 LINGO3P0C6S8 592 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 USP17L8P0C7I0 530 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 KIF5BP33176 963 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 TRAF1Q13077 416 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC02228-204ENST00000642115 UAP1Q16222 522 aaPredicted RBP17.22■□□□□ 0.35
LINC02228-204ENST00000642115 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 FAM114A1Q8IWE2 563 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 TRIM9Q9C026 710 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 KBTBD4Q9NVX7 518 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 KLHDC7AQ5VTJ3 777 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 PNMA1Q8ND90 353 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 MDM1Q8TC05 714 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 PCDHA6Q9UN73 950 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 PCDHA8Q9Y5H6 950 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 TRPM3Q9HCF6 1732 aaPredicted RBP17.22■□□□□ 0.35
LINC02228-204ENST00000642115 TXKP42681 527 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 RIPK1Q13546 671 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 ZNF34Q8IZ26 560 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 ZNF384Q8TF68 577 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 FAM167BQ9BTA0 163 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
LINC02228-204ENST00000642115 NOP53Q9NZM5 478 aaKnown RBP17.22■□□□□ 0.35
LINC02228-204ENST00000642115 ORC4O43929 436 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC02228-204ENST00000642115 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
LINC02228-204ENST00000642115 RETREG2Q8NC44 543 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 SLC5A4Q9NY91 659 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 CLSTN1O94985 981 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 KLRK1P26718 216 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
LINC02228-204ENST00000642115 DCP1AQ9NPI6 582 aaPredicted RBP17.21■□□□□ 0.35
LINC02228-204ENST00000642115 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
LINC02228-204ENST00000642115 RAD51CO43502 376 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 MAGOHP61326 146 aaKnown RBP17.2■□□□□ 0.34
LINC02228-204ENST00000642115 EHHADHQ08426 723 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 FAM133BQ5BKY9 247 aaKnown RBP17.2■□□□□ 0.34
LINC02228-204ENST00000642115 LRIG3Q6UXM1 1119 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 DNAAF5Q86Y56 855 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 MAGOHBQ96A72 148 aaKnown RBP17.2■□□□□ 0.34
LINC02228-204ENST00000642115 LRRC4CQ9HCJ2 640 aa17.2■□□□□ 0.34
LINC02228-204ENST00000642115 SLC12A4Q9UP95 1085 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms