RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TRIM43Q96BQ3 446 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-231ENST00000640499 LLPHQ9BRT6 129 aaKnown RBP30.44■■■□□ 2.46
VEGFA-231ENST00000640499 PDLIM7Q9NR12 457 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 PKD2L1Q9P0L9 805 aa30.44■■■□□ 2.46
VEGFA-231ENST00000640499 MAFGO15525 162 aa30.43■■■□□ 2.46
VEGFA-231ENST00000640499 PPFIA4O75335 1185 aa30.43■■■□□ 2.46
VEGFA-231ENST00000640499 CIITAP33076 1130 aa30.43■■■□□ 2.46
VEGFA-231ENST00000640499 CDHR1Q96JP9 859 aa30.43■■■□□ 2.46
VEGFA-231ENST00000640499 GPR20Q99678 358 aa30.43■■■□□ 2.46
VEGFA-231ENST00000640499 AGO4Q9HCK5 861 aaKnown RBP30.43■■■□□ 2.46
VEGFA-231ENST00000640499 CD4P01730 458 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 ITGB3BPQ13352 177 aaPredicted RBP30.42■■■□□ 2.46
VEGFA-231ENST00000640499 NBPF20Q3BBV1 942 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 NIPA1Q7RTP0 329 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 IL27Q8NEV9 243 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 LENG9Q96B70 501 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 TMX3Q96JJ7 454 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 C16orf70Q9BSU1 422 aa30.42■■■□□ 2.46
VEGFA-231ENST00000640499 ZNF286BP0CG31 522 aa30.41■■■□□ 2.46
VEGFA-231ENST00000640499 ITGB8P26012 769 aa30.41■■■□□ 2.46
VEGFA-231ENST00000640499 EARS2Q5JPH6 523 aaKnown RBP30.41■■■□□ 2.46
VEGFA-231ENST00000640499 TBCKQ8TEA7 893 aa30.41■■■□□ 2.46
VEGFA-231ENST00000640499 HAS3O00219 553 aa30.4■■■□□ 2.46
VEGFA-231ENST00000640499 F2P00734 622 aa30.4■■■□□ 2.46
VEGFA-231ENST00000640499 ZNF76P36508 570 aa30.4■■■□□ 2.46
VEGFA-231ENST00000640499 TNFRSF25Q93038 417 aa30.4■■■□□ 2.46
VEGFA-231ENST00000640499 GSTTP1A0A1W2PQM5 241 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 CLTBP09497 229 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 XBP1P17861 261 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 FOSBP53539 338 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 PLA2G4DQ86XP0 818 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 UIMC1Q96RL1 719 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 TRPV6Q9H1D0 765 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 PRO3102Q9H379 93 aa30.39■■■□□ 2.46
VEGFA-231ENST00000640499 LTBP2Q14767 1821 aa30.38■■■□□ 2.45
VEGFA-231ENST00000640499 DHX15O43143 795 aaKnown RBP30.38■■■□□ 2.45
VEGFA-231ENST00000640499 USP11P51784 963 aa30.38■■■□□ 2.45
VEGFA-231ENST00000640499 SP4Q02446 784 aa30.38■■■□□ 2.45
VEGFA-231ENST00000640499 KRT40Q6A162 431 aa30.38■■■□□ 2.45
VEGFA-231ENST00000640499 GIMAP8Q8ND71 665 aaPredicted RBP30.38■■■□□ 2.45
VEGFA-231ENST00000640499 TBX21Q9UL17 535 aa30.38■■■□□ 2.45
VEGFA-231ENST00000640499 FAM205CA6NFA0 338 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 DCDC2CA8MYV0 355 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 KIAA0355O15063 1070 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 B4GALT4O60513 344 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 NR5A1Q13285 461 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 NFRKBQ6P4R8 1299 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 GDF15Q99988 308 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 PRDM5Q9NQX1 630 aaPredicted RBP30.37■■■□□ 2.45
VEGFA-231ENST00000640499 NFASCO94856 1347 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 MROH7Q68CQ1 1323 aa30.37■■■□□ 2.45
VEGFA-231ENST00000640499 MMP1P03956 469 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 LGALS2P05162 132 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 PSEN2P49810 448 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 PRR16Q569H4 304 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 KRT25Q7Z3Z0 450 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 CTAGE1Q96RT6 745 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 SEZ6LQ9BYH1 1024 aa30.36■■■□□ 2.45
VEGFA-231ENST00000640499 TRMT13Q9NUP7 481 aaKnown RBP30.36■■■□□ 2.45
VEGFA-231ENST00000640499 CYP3A7-CYP3A51PA0A087WV96 503 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 NOP56O00567 594 aaKnown RBP30.35■■■□□ 2.45
VEGFA-231ENST00000640499 CYP3A7P24462 503 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 MAGEA10P43363 369 aaPredicted RBP30.35■■■□□ 2.45
VEGFA-231ENST00000640499 HIC1Q14526 733 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 MFSD10Q14728 455 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 NONOQ15233 471 aaKnown RBP eCLIP30.35■■■□□ 2.453e-6■■■□□ 16.3
VEGFA-231ENST00000640499 INF2Q27J81 1249 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 TRIM50Q86XT4 487 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 MBOAT7Q96N66 472 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 TMEM39AQ9NV64 488 aa30.35■■■□□ 2.45
VEGFA-231ENST00000640499 RANBP2P49792 3224 aaKnown RBP30.34■■■□□ 2.45
VEGFA-231ENST00000640499 BTBD18B2RXH4 712 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 TDP2O95551 362 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 MCM2P49736 904 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 CHMP4BP1P59074 171 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 KIAA0753Q2KHM9 967 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 CHRDL2Q6WN34 429 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 SESTD1Q86VW0 696 aa30.34■■■□□ 2.45
VEGFA-231ENST00000640499 JPH1Q9HDC5 661 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-231ENST00000640499 COLQQ9Y215 455 aaPredicted RBP30.34■■■□□ 2.45
VEGFA-231ENST00000640499 CCNE2O96020 404 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 KRT2P35908 639 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 HMGN5P82970 282 aaKnown RBP30.33■■■□□ 2.45
VEGFA-231ENST00000640499 MDM2Q00987 491 aaPredicted RBP30.33■■■□□ 2.45
VEGFA-231ENST00000640499 GUCY1B3Q02153 619 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 PIK3AP1Q6ZUJ8 805 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 SEPT1Q8WYJ6 367 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 PCYT2Q99447 389 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 HDAC6Q9UBN7 1215 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 SLC9A2Q9UBY0 812 aa30.33■■■□□ 2.45
VEGFA-231ENST00000640499 H3BRB1 525 aa30.32■■■□□ 2.44
VEGFA-231ENST00000640499 IPO5O00410 1097 aaKnown RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 MSH4O15457 936 aa30.32■■■□□ 2.44
VEGFA-231ENST00000640499 TCF7P36402 384 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 PTPN11Q06124 597 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 UTP14CQ5TAP6 766 aaKnown RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 GDF6Q6KF10 455 aaPredicted RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 DIS3L2Q8IYB7 885 aaKnown RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 TUT1Q9H6E5 874 aaKnown RBP30.32■■■□□ 2.44
VEGFA-231ENST00000640499 CCDC194A0A1B0GVG4 234 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms