RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CAPN15O75808 1086 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 MMP3P08254 477 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 TOB1P50616 345 aaPredicted RBP14.97□□□□□ -0.01
GTF3A-209ENST00000640289 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 KCNA10Q16322 511 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 PPP4R3AQ6IN85 833 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 EMID1Q96A84 441 aaPredicted RBP14.97□□□□□ -0.01
GTF3A-209ENST00000640289 SPATA33Q96N06 139 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 MYH7BA7E2Y1 1941 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 KIAA1217Q5T5P2 1943 aa14.97□□□□□ -0.01
GTF3A-209ENST00000640289 FRMPD3Q5JV73 1810 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 A6NJR5 290 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 ASGR1P07306 291 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 MYL3P08590 195 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 GCFC2P16383 781 aaKnown RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 MCM7P33993 719 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 CPT1AP50416 773 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 RESTQ13127 1097 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 PKP1Q13835 747 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 ZNF174Q15697 407 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 TTC38Q5R3I4 469 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 METTL7BQ6UX53 244 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 PPTC7Q8NI37 304 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 ETNPPLQ8TBG4 499 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 FERMT2Q96AC1 680 aa14.96□□□□□ -0.01
GTF3A-209ENST00000640289 PAWRQ96IZ0 340 aaKnown RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 NAP1L4Q99733 375 aaKnown RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 NOL7Q9UMY1 257 aaKnown RBP14.96□□□□□ -0.01
GTF3A-209ENST00000640289 NFASCO94856 1347 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 ACLYP53396 1101 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 FAM173BQ6P4H8 233 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 PCSK9Q8NBP7 692 aaKnown RBP14.95□□□□□ -0.02
GTF3A-209ENST00000640289 GIMAP8Q8ND71 665 aaPredicted RBP14.95□□□□□ -0.02
GTF3A-209ENST00000640289 HAS1Q92839 578 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 SLC5A5Q92911 643 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 GPR20Q99678 358 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 TSEN34Q9BSV6 310 aaKnown RBP14.95□□□□□ -0.02
GTF3A-209ENST00000640289 JPH1Q9HDC5 661 aaPredicted RBP14.95□□□□□ -0.02
GTF3A-209ENST00000640289 KCNMB3Q9NPA1 279 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 PHF24Q9UPV7 400 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 PCDHB6Q9Y5E3 794 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 BRCA2P51587 3418 aa14.95□□□□□ -0.02
GTF3A-209ENST00000640289 A0A1W2PQ45 241 aaPredicted RBP14.94□□□□□ -0.02
GTF3A-209ENST00000640289 A0A1W2PQY0 241 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 NOP56O00567 594 aaKnown RBP14.94□□□□□ -0.02
GTF3A-209ENST00000640289 NEMFO60524 1076 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 CCNE2O96020 404 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 COL6A1P12109 1028 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 CAPN2P17655 700 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
GTF3A-209ENST00000640289 CXCL17Q6UXB2 119 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 BRAPQ7Z569 592 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 UBE2Q1Q7Z7E8 422 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 SENP6Q9GZR1 1112 aaPredicted RBP14.94□□□□□ -0.02
GTF3A-209ENST00000640289 TMEM60Q9H2L4 133 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 TBC1D22BQ9NU19 505 aa14.94□□□□□ -0.02
GTF3A-209ENST00000640289 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
GTF3A-209ENST00000640289 GSTTP1A0A1W2PQM5 241 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 MOXD2PA6NHM9 499 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 ZEB2O60315 1214 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 PSMD10O75832 226 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 ZNF286BP0CG31 522 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 PURAQ00577 322 aaKnown RBP14.93□□□□□ -0.02
GTF3A-209ENST00000640289 CALCRLQ16602 461 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 DGKDQ16760 1214 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 LRCH2Q5VUJ6 765 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 PPP1R13LQ8WUF5 828 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 RIT2Q99578 217 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 TEKT3Q9BXF9 490 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
GTF3A-209ENST00000640289 TBX3O15119 743 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 CHMP2AO43633 222 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 MARCH6O60337 910 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 GAS7O60861 476 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 LGALS2P05162 132 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 ZSCAN22P10073 491 aaPredicted RBP14.92□□□□□ -0.02
GTF3A-209ENST00000640289 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
GTF3A-209ENST00000640289 TCF7P36402 384 aaPredicted RBP14.92□□□□□ -0.02
GTF3A-209ENST00000640289 ACTR2P61160 394 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 PSMC6P62333 389 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
GTF3A-209ENST00000640289 NECAB2Q7Z6G3 386 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 SEPT1Q8WYJ6 367 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 KAT2BQ92831 832 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 UNC45AQ9H3U1 944 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 STARD7Q9NQZ5 370 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
GTF3A-209ENST00000640289 ELP1O95163 1332 aa14.92□□□□□ -0.02
GTF3A-209ENST00000640289 PPFIA4O75335 1185 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms