RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 DCAF4Q8WV16 495 aa7.34□□□□□ -1.23
PRKCH-228ENST00000640011 PABPC5Q96DU9 382 aaKnown RBP7.34□□□□□ -1.23
PRKCH-228ENST00000640011 IRF2BPLQ9H1B7 796 aa7.34□□□□□ -1.23
PRKCH-228ENST00000640011 RANBP17Q9H2T7 1088 aaKnown RBP7.34□□□□□ -1.23
PRKCH-228ENST00000640011 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
PRKCH-228ENST00000640011 STX8Q9UNK0 236 aa7.34□□□□□ -1.23
PRKCH-228ENST00000640011 GREB1LQ9C091 1923 aaPredicted RBP7.34□□□□□ -1.23
PRKCH-228ENST00000640011 MUC6Q6W4X9 2439 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 GBF1Q92538 1859 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 LCHNA4D1U4 455 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 LINC01553A4QN01 128 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 CCER2I3L3R5 266 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 ADH1BP00325 375 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 AMHP03971 560 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 RLBP1P12271 317 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 CKBP12277 381 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 IL9P15248 144 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 EDNRBP24530 442 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 PTK7Q13308 1070 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 RNF207Q6ZRF8 634 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 KCTD1Q719H9 257 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 ADHFE1Q8IWW8 467 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 OSBP2Q969R2 916 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 ARID3AQ99856 593 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 NAPBQ9H115 298 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 IL21Q9HBE4 155 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 ECHDC1Q9NTX5 307 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 MTUS1Q9ULD2 1270 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 DDX19BQ9UMR2 479 aa7.33□□□□□ -1.24
PRKCH-228ENST00000640011 WDFY4Q6ZS81 3184 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 RNF113AO15541 343 aaKnown RBP7.32□□□□□ -1.24
PRKCH-228ENST00000640011 GH1P01241 217 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 PTGS1P23219 599 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 DEFB103AP81534 67 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 ZP2Q05996 745 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 PPARAQ07869 468 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 DGKDQ16760 1214 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 PTPRNQ16849 979 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 CCDC96Q2M329 555 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 TMEM63BQ5T3F8 832 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 BMP8AQ7Z5Y6 402 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 C7orf31Q8N865 590 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 RGS22Q8NE09 1264 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 BCL11AQ9H165 835 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 NSUN3Q9H649 340 aaKnown RBP7.32□□□□□ -1.24
PRKCH-228ENST00000640011 EPB41L4AQ9HCS5 686 aaPredicted RBP7.32□□□□□ -1.24
PRKCH-228ENST00000640011 PRM3Q9NNZ6 103 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 PLSCR2Q9NRY7 297 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 GTF2IRD1Q9UHL9 959 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 RWDD3Q9Y3V2 267 aa7.32□□□□□ -1.24
PRKCH-228ENST00000640011 WDR19Q8NEZ3 1342 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 BAZ2AQ9UIF9 1905 aaKnown RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 H3BNC9 293 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 H3BQ06 376 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 NFIBO00712 420 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 NBNO60934 754 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 LGR5O75473 907 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 CHGBP05060 677 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 MMP3P08254 477 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 CALML3P27482 149 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 NOVP48745 357 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 CHMP4BP1P59074 171 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 RPS6P62753 249 aaKnown RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 HTRA4P83105 476 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 VAC14Q08AM6 782 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 EPC2Q52LR7 807 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 HERC4Q5GLZ8 1057 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 SYDE2Q5VT97 1194 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 GDF6Q6KF10 455 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 MYOCDQ8IZQ8 938 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 CCDC82Q8N4S0 544 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 PPP2R3CQ969Q6 453 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 RNF166Q96A37 237 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 EMID1Q96A84 441 aaPredicted RBP7.31□□□□□ -1.24
PRKCH-228ENST00000640011 IWS1Q96ST2 819 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 C17orf80Q9BSJ5 609 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 LMAN2LQ9H0V9 348 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 EVA1BQ9NVM1 165 aa7.31□□□□□ -1.24
PRKCH-228ENST00000640011 USP34Q70CQ2 3546 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 MCM3APO60318 1980 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 SCN10AQ9Y5Y9 1956 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 CAND2O75155 1236 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 RB1P06400 928 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 NT5C2P49902 561 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 GPNMBQ14956 572 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 SMAD2Q15796 467 aaKnown RBP7.3□□□□□ -1.24
PRKCH-228ENST00000640011 STXBP2Q15833 593 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 KCNV1Q6PIU1 500 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 SLC30A10Q6XR72 485 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 SPRED2Q7Z698 418 aa7.3□□□□□ -1.24
PRKCH-228ENST00000640011 FBXO11Q86XK2 927 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms