RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 BARX1Q9HBU1 254 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-211ENST00000638889 CD248Q9HCU0 757 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 SLC6A20Q9NP91 592 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 GPR42O15529 346 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 CHGBP05060 677 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 NFATC3Q12968 1075 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 ICAM4Q14773 271 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 CDSNQ15517 529 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 SLFN13Q68D06 897 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 RSPO2Q6UXX9 243 aaPredicted RBP5.85□□□□□ -1.47
CCDC7-211ENST00000638889 SLC16A11Q8NCK7 471 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 SH3RF3Q8TEJ3 882 aaPredicted RBP5.85□□□□□ -1.47
CCDC7-211ENST00000638889 SEMA4AQ9H3S1 761 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 WASF3Q9UPY6 502 aa5.85□□□□□ -1.47
CCDC7-211ENST00000638889 GNL2Q13823 731 aaKnown RBP5.84□□□□□ -1.47
CCDC7-211ENST00000638889 TRMT10BQ6PF06 316 aaKnown RBP5.84□□□□□ -1.47
CCDC7-211ENST00000638889 IGDCC4Q8TDY8 1250 aa5.84□□□□□ -1.47
CCDC7-211ENST00000638889 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
CCDC7-211ENST00000638889 PDGFDQ9GZP0 370 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-211ENST00000638889 KLC2Q9H0B6 622 aa5.84□□□□□ -1.47
CCDC7-211ENST00000638889 DLL4Q9NR61 685 aa5.84□□□□□ -1.47
CCDC7-211ENST00000638889 NUB1Q9Y5A7 615 aa5.84□□□□□ -1.47
CCDC7-211ENST00000638889 UNCXA6NJT0 531 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 FSHBP01225 129 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 C6P13671 934 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 TACR2P21452 398 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 ETFBP38117 255 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 PPP2R2AP63151 447 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 SLC10A6Q3KNW5 377 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 TMC5Q6UXY8 1006 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 MICAL1Q8TDZ2 1067 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 SORCS2Q96PQ0 1159 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 ADAM29Q9UKF5 820 aa5.83□□□□□ -1.48
CCDC7-211ENST00000638889 PATE3B3GLJ2 98 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 B4GALT4O60513 344 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 GJB6O95452 261 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 COL6A1P12109 1028 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 GDF5P43026 501 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 VASNQ6EMK4 673 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 CRIP3Q6Q6R5 217 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 SPRED1Q7Z699 444 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 PROSER1Q86XN7 944 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 DTX3Q8N9I9 347 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 ZDHHC9Q9Y397 364 aa5.82□□□□□ -1.48
CCDC7-211ENST00000638889 A0A1W2PQU0 124 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 CYR61O00622 381 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 ERCC5P28715 1186 aaPredicted RBP5.81□□□□□ -1.48
CCDC7-211ENST00000638889 GRIA2P42262 883 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 SELENOPP49908 381 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 SMAD2Q15796 467 aaKnown RBP5.81□□□□□ -1.48
CCDC7-211ENST00000638889 OTOP3Q7RTS5 596 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 PIP4K2CQ8TBX8 421 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.81□□□□□ -1.48
CCDC7-211ENST00000638889 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 JAM3Q9BX67 310 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 SEC61A2Q9H9S3 476 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 TCAF1Q9Y4C2 921 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 TESMINQ9Y4I5 508 aa5.81□□□□□ -1.48
CCDC7-211ENST00000638889 SLC27A2O14975 620 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 KLHL18O94889 574 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 FGRP09769 529 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
CCDC7-211ENST00000638889 HOMEZQ8IX15 550 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 CLEC4DQ8WXI8 215 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 SGSM3Q96HU1 749 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 ZFYVE21Q9BQ24 234 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 PHF20Q9BVI0 1012 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 MEGF9Q9H1U4 602 aa5.8□□□□□ -1.48
CCDC7-211ENST00000638889 DLX3O60479 287 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 MSCO60682 206 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 FZD7O75084 574 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 ZNF623O75123 536 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 FAHP16930 419 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 ACVRL1P37023 503 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 SPIRE1Q08AE8 756 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 R3HDM1Q15032 1099 aaKnown RBP5.79□□□□□ -1.48
CCDC7-211ENST00000638889 KIZQ2M2Z5 673 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 Q6ZUG5 572 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 USP53Q70EK8 1073 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 USP51Q70EK9 711 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 RALYLQ86SE5 291 aaKnown RBP5.79□□□□□ -1.48
CCDC7-211ENST00000638889 Q8N1X5 172 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 NUDT10Q8NFP7 164 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
CCDC7-211ENST00000638889 DCAF4Q8WV16 495 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 ZNF408Q9H9D4 720 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 RBPJLQ9UBG7 517 aa5.79□□□□□ -1.48
CCDC7-211ENST00000638889 R3HCC1Q9Y3T6 440 aaKnown RBP5.79□□□□□ -1.48
CCDC7-211ENST00000638889 IQCA1LA6NCM1 817 aa5.78□□□□□ -1.48
CCDC7-211ENST00000638889 SUV39H1O43463 412 aa5.78□□□□□ -1.48
CCDC7-211ENST00000638889 FBXO21O94952 628 aa5.78□□□□□ -1.48
CCDC7-211ENST00000638889 CNOT4O95628 575 aaKnown RBP5.78□□□□□ -1.48
CCDC7-211ENST00000638889 KNG1P01042 644 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms