RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ZNF76P36508 570 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 RABEP1Q15276 862 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 UMODL1Q5DID0 1318 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 UTP14CQ5TAP6 766 aaKnown RBP14.28□□□□□ -0.12
CLN6-225ENST00000638144 BLIDQ8IZY5 108 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 SLC43A3Q8NBI5 491 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 BADQ92934 168 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 TBC1D32Q96NH3 1257 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 GDF15Q99988 308 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 KCNH7Q9NS40 1196 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 TBX21Q9UL17 535 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 PCDHA4Q9UN74 947 aa14.28□□□□□ -0.12
CLN6-225ENST00000638144 MROH7Q68CQ1 1323 aa14.27□□□□□ -0.12
CLN6-225ENST00000638144 DDX39AO00148 427 aaKnown RBP14.27□□□□□ -0.13
CLN6-225ENST00000638144 LGALS2P05162 132 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 CYP2C9P11712 490 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 PSEN2P49810 448 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.13
CLN6-225ENST00000638144 NEDD9Q14511 834 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 MFSD10Q14728 455 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 CEP55Q53EZ4 464 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 METTL7BQ6UX53 244 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 BICD2Q8TD16 824 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 GPR20Q99678 358 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 LBHD1Q9BQE6 289 aaPredicted RBP14.27□□□□□ -0.13
CLN6-225ENST00000638144 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 PRO3102Q9H379 93 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 LAMA3Q16787 3333 aa14.27□□□□□ -0.13
CLN6-225ENST00000638144 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 KIAA0355O15063 1070 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 TLR3O15455 904 aaKnown RBP14.26□□□□□ -0.13
CLN6-225ENST00000638144 EDIL3O43854 480 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 KPNA6O60684 536 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 F2P00734 622 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 CD4P01730 458 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
CLN6-225ENST00000638144 RAG1P15918 1043 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 CYP2C18P33260 490 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 PHF20Q9BVI0 1012 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
CLN6-225ENST00000638144 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
CLN6-225ENST00000638144 HDAC6Q9UBN7 1215 aa14.26□□□□□ -0.13
CLN6-225ENST00000638144 M0R2N6 131 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 MEIS1O00470 390 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 GUCY1B3Q02153 619 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 PRR16Q569H4 304 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 HABP4Q5JVS0 413 aaKnown RBP14.25□□□□□ -0.13
CLN6-225ENST00000638144 GDF6Q6KF10 455 aaPredicted RBP14.25□□□□□ -0.13
CLN6-225ENST00000638144 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 DAGLBQ8NCG7 672 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 TBCKQ8TEA7 893 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 GJA10Q969M2 543 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 CDHR1Q96JP9 859 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 SENP7Q9BQF6 1050 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 SCN5AQ14524 2016 aa14.25□□□□□ -0.13
CLN6-225ENST00000638144 PPFIA4O75335 1185 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 TDP2O95551 362 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 CYP3A4P08684 503 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
CLN6-225ENST00000638144 EPHB4P54760 987 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
CLN6-225ENST00000638144 HIC1Q14526 733 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 INF2Q27J81 1249 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 EARS2Q5JPH6 523 aaKnown RBP14.24□□□□□ -0.13
CLN6-225ENST00000638144 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 LENG9Q96B70 501 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 HIPK3Q9H422 1215 aa14.24□□□□□ -0.13
CLN6-225ENST00000638144 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
CLN6-225ENST00000638144 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 GSTTP1A0A1W2PQM5 241 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 H3BRB1 525 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 HAS3O00219 553 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 ST18O60284 1047 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 TIMP1P01033 207 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 XBP1P17861 261 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 MARK3P27448 753 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 CCL23P55773 120 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 NR5A1Q13285 461 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 PTGISQ16647 500 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 C9orf50Q5SZB4 431 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 GIMAP8Q8ND71 665 aaPredicted RBP14.23□□□□□ -0.13
CLN6-225ENST00000638144 WASF1Q92558 559 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
CLN6-225ENST00000638144 CTAGE1Q96RT6 745 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 SDF4Q9BRK5 362 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 NOC4LQ9BVI4 516 aaKnown RBP14.23□□□□□ -0.13
CLN6-225ENST00000638144 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 WNT8AQ9H1J5 351 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
CLN6-225ENST00000638144 SLC9A2Q9UBY0 812 aa14.23□□□□□ -0.13
CLN6-225ENST00000638144 NOD1Q9Y239 953 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms