RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MMP13P45452 471 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 IRGCQ6NXR0 463 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 FBF1Q8TES7 1133 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
CAPN3-221ENST00000638141 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 PCMTD2Q9NV79 361 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 RAD51CO43502 376 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 KRT16P08779 473 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 CXCR5P32302 372 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 PPP1R2P41236 205 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-221ENST00000638141 PLS1Q14651 629 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 ALX1Q15699 326 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-221ENST00000638141 OR52E8Q6IFG1 317 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 CYB5R4Q7L1T6 521 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 LCA5Q86VQ0 697 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-221ENST00000638141 KRT12Q99456 494 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 PIDD1Q9HB75 910 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 ATXN10Q9UBB4 475 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 SLC4A7Q9Y6M7 1214 aa13.14□□□□□ -0.31
CAPN3-221ENST00000638141 BACH1O14867 736 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 XBP1P17861 261 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 KIF11P52732 1056 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ERVK-9P63128 1117 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ADSSL1Q8N142 457 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 KCNH5Q8NCM2 988 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 DNAAF2Q9NVR5 837 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 VPS54Q9P1Q0 977 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 SNX3O60493 162 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 MMEP08473 750 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CCNB1P14635 433 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CALB2P22676 271 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 TPP2P29144 1249 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 FAM133BQ5BKY9 247 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CROCCP2Q86T23 111 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ENDOVQ8N8Q3 282 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 USP38Q8NB14 1042 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 NCSTNQ92542 709 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 PGM2Q96G03 612 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
CAPN3-221ENST00000638141 RPL26L1Q9UNX3 145 aaKnown RBP13.13□□□□□ -0.31
CAPN3-221ENST00000638141 CHD4Q14839 1912 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 EYA2O00167 538 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 GPAA1O43292 621 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 PDE6BP35913 854 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 TUBP50607 506 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 PDE6CP51160 858 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 TSNAXIP1Q2TAA8 658 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ARHGAP18Q8N392 663 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 OR2W6PQ8NHA6 318 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 SEC14L1Q92503 715 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 EPSTI1Q96J88 318 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 SLX1AQ9BQ83 275 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 CCDC28BQ9BUN5 200 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ATP8A2Q9NTI2 1148 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 F8VZ95 297 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 RPN1P04843 607 aaKnown RBP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 CASP1P29466 404 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 ALDH1B1P30837 517 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 PCK1P35558 622 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 HLTFQ14527 1009 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
CAPN3-221ENST00000638141 KRT26Q7Z3Y9 468 aa13.12□□□□□ -0.31
CAPN3-221ENST00000638141 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms