RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 EPHX2P34913 555 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 NOLC1Q14978 699 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 ARMCX5Q6P1M9 558 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 THAP9Q9H5L6 903 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 SLC39A2Q9NP94 309 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
CACNA1D-228ENST00000638120 SCN4AP35499 1836 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 LRRC10BA6NIK2 292 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 SFPQP23246 707 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 COASYQ13057 564 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 TMEM132BQ14DG7 1078 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 KRT31Q15323 416 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 TCP11X2Q5H9J9 407 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 GPBP1Q86WP2 473 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 GUF1Q8N442 669 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 NOC3LQ8WTT2 800 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 CDCA5Q96FF9 252 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 RIT2Q99578 217 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 TUFT1Q9NNX1 390 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 DNM3Q9UQ16 869 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
CACNA1D-228ENST00000638120 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 MUTP22033 750 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 NF2P35240 595 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 PBX1P40424 430 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 TBX2Q13207 712 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 KCNJ12Q14500 433 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 PGM5Q15124 567 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 SPECC1LQ69YQ0 1117 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 NSMFQ6X4W1 530 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 IRF2BP1Q8IU81 584 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 HSD17B14Q9BPX1 270 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
CACNA1D-228ENST00000638120 FRMD3A2A2Y4 597 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 CHMP2AO43633 222 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 OFD1O75665 1012 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 SKILP12757 684 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PSMC6P62333 389 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PTPN21Q16825 1174 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 FAM26FQ5R3K3 315 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PDCD2LQ9BRP1 358 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PXMP2Q9NR77 195 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 KCNH7Q9NS40 1196 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 TEX33O43247 280 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 EYA4O95677 639 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 BAATQ14032 418 aaPredicted RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 ARSHQ5FYA8 562 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 DYDC2Q96IM9 177 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 SRRTQ9BXP5 876 aaKnown RBP13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 MAF1Q9H063 256 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 RGL1Q9NZL6 768 aa13.64□□□□□ -0.23
CACNA1D-228ENST00000638120 SLITRK3O94933 977 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 PPATQ06203 517 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 MTMR1Q13613 665 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 EPHA7Q15375 998 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 GPR162Q16538 588 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 FOXR2Q6PJQ5 311 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 PROCA1Q8NCQ7 364 aaPredicted RBP13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 NEK9Q8TD19 979 aa13.63□□□□□ -0.23
CACNA1D-228ENST00000638120 SEMA6BQ9H3T3 888 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms