RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 SEMA3FQ13275 785 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 LAMC2Q13753 1193 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 METTL7BQ6UX53 244 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 TLK2Q86UE8 772 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 OR6J1Q8NGC5 347 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 SPATA32Q96LK8 384 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 TFIP11Q9UBB9 837 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 SLC9A2Q9UBY0 812 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 DDX20Q9UHI6 824 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 PCDHA12Q9UN75 941 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
CACNA1A-252ENST00000637832 PCNTO95613 3336 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 SMPD1P17405 629 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 CPT1AP50416 773 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 SLC39A14Q15043 492 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 CYFIP1Q7L576 1253 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 TRPV1Q8NER1 839 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 ARMC5Q96C12 935 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 MTMR9Q96QG7 549 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 STK24Q9Y6E0 443 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 MORC2Q9Y6X9 1032 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
CACNA1A-252ENST00000637832 ELP1O95163 1332 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 WDR64B1ANS9 1081 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 SPTLC2O15270 562 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ATP9AO75110 1047 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 PPP6R2O75170 966 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 PSMD10O75832 226 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 FARP2O94887 1054 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ARIH2O95376 493 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 CCL5P13501 91 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 SFNP31947 248 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 JAK3P52333 1124 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ITGB3BPQ13352 177 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 LINC00301Q8NCQ3 95 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 RDM1Q8NG50 284 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 HAS1Q92839 578 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 MCOLN1Q9GZU1 580 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 RNF208Q9H0X6 261 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 XPNPEP3Q9NQH7 507 aa13.71□□□□□ -0.21
CACNA1A-252ENST00000637832 FRMPD3Q5JV73 1810 aa13.71□□□□□ -0.22
CACNA1A-252ENST00000637832 VWA3AA6NCI4 1184 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 DYNC1LI2O43237 492 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 CHMP2AO43633 222 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 ZEB2O60315 1214 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 ME1P48163 572 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 SP2Q02086 613 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 SP4Q02446 784 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 PTPAQ15257 358 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 HAUS3Q68CZ6 603 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 MIER3Q7Z3K6 550 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 RNF180Q86T96 592 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 AK8Q96MA6 479 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 UNC93B1Q9H1C4 597 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 TCHHQ07283 1943 aa13.7□□□□□ -0.22
CACNA1A-252ENST00000637832 SYNRGQ9UMZ2 1314 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 GOLGA6L4A6NEF3 574 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 DHX15O43143 795 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 SORBS3O60504 671 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 MYCP01106 439 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 PSAPP07602 524 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 CAPN2P17655 700 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 MARCKSP29966 332 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 TXLNAP40222 546 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 TECP42680 631 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 PDIA5Q14554 519 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 GJC2Q5T442 439 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
CACNA1A-252ENST00000637832 C4orf32Q8N8J7 132 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms