RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 DYNC1LI2O43237 492 aaPredicted RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 ADAMTS4O75173 837 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 FARP2O94887 1054 aaPredicted RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 CST5P28325 142 aaPredicted RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 MCM7P33993 719 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 ITGB3BPQ13352 177 aaPredicted RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 POTEDQ86YR6 584 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 SLFN12Q8IYM2 578 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 TNS4Q8IZW8 715 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 U2AF1L4Q8WU68 220 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 MLXIPQ9HAP2 919 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 ZDHHC9Q9Y397 364 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 PCDHB6Q9Y5E3 794 aa25.33■■□□□ 1.65
CHRNA7-231ENST00000637786 DHX15O43143 795 aaKnown RBP25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 ZNF174Q15697 407 aa25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 CYFIP1Q7L576 1253 aa25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 ARRDC4Q8NCT1 418 aa25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 PPTC7Q8NI37 304 aa25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 JPH1Q9HDC5 661 aaPredicted RBP25.32■■□□□ 1.64
CHRNA7-231ENST00000637786 POTEFA5A3E0 1075 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 A6NJR5 290 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 LAD1O00515 517 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 BAG4O95429 457 aaKnown RBP25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 BMP15O95972 392 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 CPT1AP50416 773 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 NBR1Q14596 966 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 CALCRLQ16602 461 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 BRDTQ58F21 947 aaPredicted RBP25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 RNF180Q86T96 592 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 KLHDC9Q8NEP7 349 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 HAS1Q92839 578 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 MTMR9Q96QG7 549 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 PKD2L1Q9P0L9 805 aa25.31■■□□□ 1.64
CHRNA7-231ENST00000637786 CTAGE5O15320 804 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 PSMD10O75832 226 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 PGK1P00558 417 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 C6orf222P0C671 652 aaPredicted RBP25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 PTGS1P23219 599 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 FSCN1Q16658 493 aaKnown RBP25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 LRCH2Q5VUJ6 765 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 SPATA33Q96N06 139 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 BCAS3Q9H6U6 928 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 SLC9A2Q9UBY0 812 aa25.3■■□□□ 1.64
CHRNA7-231ENST00000637786 GAS7O60861 476 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 OR52Z1P0C646 297 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 HOXD8P13378 290 aaPredicted RBP25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 KRT76Q01546 638 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 LRRC41Q15345 812 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 FOXD4L5Q5VV16 416 aaPredicted RBP25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 ATL3Q6DD88 541 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 C4orf32Q8N8J7 132 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 ANKLE1Q8NAG6 615 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 AFG1LQ8WV93 481 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 FOXD4L4Q8WXT5 416 aaPredicted RBP25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 ZNF396Q96N95 335 aaPredicted RBP25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 TSEN34Q9BSV6 310 aaKnown RBP25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 TEKT3Q9BXF9 490 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 TMEM60Q9H2L4 133 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 TCEAL9Q9UHQ7 104 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 CEP131Q9UPN4 1083 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 ATP6V1DQ9Y5K8 247 aa25.29■■□□□ 1.64
CHRNA7-231ENST00000637786 NOP56O00567 594 aaKnown RBP25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 MARCH6O60337 910 aa25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 TFRCP02786 760 aaKnown RBP25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 PTGDRQ13258 359 aa25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 HSDL1Q3SXM5 330 aa25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 GNASQ5JWF2 1037 aa25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 CCSAPQ6IQ19 270 aaPredicted RBP25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 ZNF746Q6NUN9 644 aaPredicted RBP25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 FAM173BQ6P4H8 233 aa25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 PCSK9Q8NBP7 692 aaKnown RBP25.28■■□□□ 1.64
CHRNA7-231ENST00000637786 DNM1LO00429 736 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 ZEB2O60315 1214 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 KPNA6O60684 536 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 PPFIA4O75335 1185 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 MMP3P08254 477 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 PRPHP41219 470 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 ATP2C1P98194 919 aaPredicted RBP25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 B3GNT9Q6UX72 402 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 GPR20Q99678 358 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 POLR3EQ9NVU0 708 aa25.27■■□□□ 1.64
CHRNA7-231ENST00000637786 MYADML2A6NDP7 307 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 PPP2R5CQ13362 524 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 SF3A1Q15459 793 aaKnown RBP25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 DGKDQ16760 1214 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 SMAP1Q8IYB5 467 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 SEPT1Q8WYJ6 367 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 UIMC1Q96RL1 719 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 VAV3Q9UKW4 847 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 PCDHA12Q9UN75 941 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 MORC2Q9Y6X9 1032 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 ELP1O95163 1332 aa25.26■■□□□ 1.63
CHRNA7-231ENST00000637786 KBTBD13C9JR72 458 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 SORBS3O60504 671 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 ATG7O95352 703 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 CCNE2O96020 404 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 ACTR2P61160 394 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 BEX3Q00994 111 aa25.25■■□□□ 1.63
CHRNA7-231ENST00000637786 ARL6IP4Q66PJ3 421 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms