RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
CHD2-227ENST00000637572 XPOTO43592 962 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 SCP2P22307 547 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 EPHX2P34913 555 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 KCNA1Q09470 495 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SREBF2Q12772 1141 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 BIRC3Q13489 604 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 MTMR1Q13613 665 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 PKP1Q13835 747 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 DCAF17Q5H9S7 520 aaPredicted RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 RESP18Q5W5W9 173 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TYW1BQ6NUM6 668 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 CCDC186Q7Z3E2 898 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 LUZP1Q86V48 1076 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SRBD1Q8N5C6 995 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 RASGRP4Q8TDF6 673 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 PHF20Q9BVI0 1012 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TMEM63CQ9P1W3 806 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 FAM184BQ9ULE4 1060 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 PVALEFA0A1B0GWK0 134 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 UNCXA6NJT0 531 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TMEM88BA6NKF7 163 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 NUDT7P0C024 238 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 GNAT1P11488 350 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 XRCC5P13010 732 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 EEF1GP26641 437 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 SSR1P43307 286 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 CKAP4Q07065 602 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 PNOCQ13519 176 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SNW1Q13573 536 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 MTMR2Q13614 643 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TTLL4Q14679 1199 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 C6orf132Q5T0Z8 1188 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 FAM102BQ5T8I3 360 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 ZNF658Q5TYW1 1059 aaPredicted RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 BANK1Q8NDB2 785 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 UBXN4Q92575 508 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 NOX5Q96PH1 765 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SRRTQ9BXP5 876 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 ZMYND12Q9H0C1 365 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SYNCQ9H7C4 482 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 SEL1LQ9UBV2 794 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 ARMCX3Q9UH62 379 aaPredicted RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 PUF60Q9UHX1 559 aaKnown RBP6.09□□□□□ -1.43
CHD2-227ENST00000637572 TMX2Q9Y320 296 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 PCDHB6Q9Y5E3 794 aa6.09□□□□□ -1.43
CHD2-227ENST00000637572 FAM196BA6NMK8 535 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 XRCC6P12956 609 aaKnown RBP eCLIP6.09□□□□□ -1.445e-9■□□□□ 8.2
CHD2-227ENST00000637572 LIG4P49917 911 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 GTF2A2P52657 109 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 HMGCS2P54868 508 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 TUBB2AQ13885 445 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 SURF1Q15526 300 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 MOXD1Q6UVY6 613 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 NUDT18Q6ZVK8 323 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 TMTC1Q8IUR5 882 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 CLIC6Q96NY7 704 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 TUBB2BQ9BVA1 445 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 MXD3Q9BW11 206 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 TMEM39BQ9GZU3 492 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 RAVER2Q9HCJ3 691 aaKnown RBP6.09□□□□□ -1.44
CHD2-227ENST00000637572 INCENPQ9NQS7 918 aa6.09□□□□□ -1.44
CHD2-227ENST00000637572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.09□□□□□ -1.443e-6■■■■□ 19.8
CHD2-227ENST00000637572 USP54Q70EL1 1684 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 KLRG2A4D1S0 409 aaPredicted RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 K7ENM7 598 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 CXCL11O14625 94 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 TRPA1O75762 1119 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 NEBLO76041 1014 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 CELF2O95319 508 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 EIF2AK2P19525 551 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 NOP2P46087 812 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 GCLCP48506 637 aaPredicted RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 KARSQ15046 597 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 UBE2SQ16763 222 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 ACCSQ96QU6 501 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 PRR12Q9ULL5 1215 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 TRIOBPQ9H2D6 2365 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 HAX1O00165 279 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 P4HBP07237 508 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 SKIP12755 728 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 ATF7P17544 494 aaPredicted RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 RASSF7Q02833 373 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 LRRC63Q05C16 580 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 SLC9C1Q4G0N8 1177 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 CEP55Q53EZ4 464 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 APOBEC3HQ6NTF7 200 aaKnown RBP6.08□□□□□ -1.44
CHD2-227ENST00000637572 PPP1R2P3Q6NXS1 205 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 SAMD7Q7Z3H4 446 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 PDCL2Q8N4E4 241 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 PRR7Q8TB68 274 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 MMP19Q99542 508 aa6.08□□□□□ -1.44
CHD2-227ENST00000637572 SELENOOQ9BVL4 669 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms