RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ITIH3Q06033 890 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TCP10Q12799 353 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 POTEDQ86YR6 584 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 C4orf32Q8N8J7 132 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 JPH2Q9BR39 696 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PLAGL2Q9UPG8 496 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TARSL2A2RTX5 802 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 USP17L10C9JJH3 530 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 NR2F2P24468 414 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TNNT3P45378 269 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 PRELPP51888 382 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CFAP58Q5T655 872 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CCDC125Q86Z20 511 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 FAM178BQ8IXR5 827 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CCDC26Q8TAB7 109 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 VCPKMTQ9H867 229 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 FBXO40Q9UH90 709 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 RASAL2Q9UJF2 1139 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MAPK8IP1Q9UQF2 711 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TMX2Q9Y320 296 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 SAMM50Q9Y512 469 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 SHMT1P34896 483 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TTI2Q6NXR4 508 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TATDN1Q6P1N9 297 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MYCT1Q8N699 235 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CTNNBL1Q8WYA6 563 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 CCDC102AQ96A19 550 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 NHEJ1Q9H9Q4 299 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 KIAA1586Q9HCI6 787 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 COL2A1P02458 1487 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 LMNB1P20700 586 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 RRAGAQ7L523 313 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 LRRC45Q96CN5 670 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 IFT74Q96LB3 600 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TMEM60Q9H2L4 133 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 SHTN1A0MZ66 631 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 GTPBP10A4D1E9 387 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 STAM2O75886 525 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 MAPTP10636 758 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 COASYQ13057 564 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 TMEM119Q4V9L6 283 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 KCTD1Q719H9 257 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 REXO1L1PQ8IX06 675 aa5.01□□□□□ -1.61
SCN1A-210ENST00000635776 DDX41Q9UJV9 622 aaKnown RBP5.01□□□□□ -1.61
SCN1A-210ENST00000635776 NDUFB10O96000 172 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TGFB2P61812 414 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PABPC4Q13310 644 aaKnown RBP eCLIP5□□□□□ -1.61
SCN1A-210ENST00000635776 EXOC3L4Q17RC7 722 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 DACT2Q5SW24 774 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 MORC4Q8TE76 937 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GRID2IPA4D2P6 1211 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GH2P01242 217 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 P4HBP07237 508 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 H2AFZP0C0S5 128 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GRIN1Q05586 938 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 KNOP1Q1ED39 458 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 SUPT20HL1Q3ZLR7 823 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 APOBEC3HQ6NTF7 200 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 H2AFVQ71UI9 128 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TRIM11Q96F44 468 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PBKQ96KB5 322 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF577Q9BSK1 485 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 VIPAS39Q9H9C1 493 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 KCNQ5Q9NR82 932 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 OLFML3Q9NRN5 406 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CYTH3O43739 400 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TADA3O75528 432 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PBX1P40424 430 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 NPY5RQ15761 445 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ERCC6LQ2NKX8 1250 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ODF2Q5BJF6 829 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 INTS8Q75QN2 995 aaKnown RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF384Q8TF68 577 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ACCSQ96QU6 501 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TTC26A0AVF1 554 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 EXOC3O60645 756 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GCNT3O95395 438 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 TDP2O95551 362 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PAK2Q13177 524 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 RASA3Q14644 834 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CEP55Q53EZ4 464 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 STMN4Q9H169 189 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 C17orf75Q9HAS0 396 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 FAM207AQ9NSI2 230 aaPredicted RBP5□□□□□ -1.61
SCN1A-210ENST00000635776 MTUS1Q9ULD2 1270 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 INTUQ9ULD6 942 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CCPG1Q9ULG6 757 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 C19orf81C9J6K1 198 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 HSF2BPO75031 334 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 BPIFB4P59827 614 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CBX1P83916 185 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 GRB10Q13322 594 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 MTMR3Q13615 1198 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 FAM182BQ5T319 152 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 MAATS1Q7Z4T9 603 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 CDAN1Q8IWY9 1227 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 PLCB1Q9NQ66 1216 aa5□□□□□ -1.61
SCN1A-210ENST00000635776 ZNF219Q9P2Y4 722 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms