RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
PSPC1-207ENST00000635251 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L10C9JJH3 530 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 ZBTB5O15062 677 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 SERPINB2P05120 415 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 SERPING1P05155 500 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GCFC2P16383 781 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 DNA2P51530 1060 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GABPAQ06546 454 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 ASTE1Q2TB18 679 aaPredicted RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 FAM83BQ5T0W9 1011 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 KLHDC7AQ5VTJ3 777 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 HGSNATQ68CP4 663 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 KCTD1Q719H9 257 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 RNF10Q8N5U6 811 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 CERKQ8TCT0 537 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 MTMR8Q96EF0 704 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 RUFY1Q96T51 708 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 SERPINB13Q9UIV8 391 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 IGKV6D-41A0A0C4DH26 115 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 AGPSO00116 658 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 BBOX1O75936 387 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GNA14O95837 355 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 EPHB4P54760 987 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 ARID5AQ03989 594 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 CFAP221Q4G0U5 840 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 ZCWPW2Q504Y3 356 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 FOXR2Q6PJQ5 311 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 FGFBP2Q9BYJ0 223 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 RASSF4Q9H2L5 321 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 DDX4Q9NQI0 724 aaKnown RBP11.81□□□□□ -0.52
PSPC1-207ENST00000635251 STIM2Q9P246 746 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
PSPC1-207ENST00000635251 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 CRY2Q49AN0 593 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
PSPC1-207ENST00000635251 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 TLR10Q9BXR5 811 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 PLEKHA4Q9H4M7 779 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 KANSL2Q9H9L4 492 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 USP40Q9NVE5 1235 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
PSPC1-207ENST00000635251 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 POTECB2RU33 542 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 OPA1O60313 960 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 PALMO75781 387 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 NOL4O94818 638 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 APBA1Q02410 837 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 KLHL30Q0D2K2 578 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 ADAM9Q13443 819 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 SYN2Q92777 582 aaPredicted RBP11.8□□□□□ -0.52
PSPC1-207ENST00000635251 MS4A14Q96JA4 679 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
PSPC1-207ENST00000635251 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 GOLGA8KD6RF30 607 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 RBAK-RBAKDNI3L0D1 243 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 TRIM66O15016 1216 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 TLR2O60603 784 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 HSF2BPO75031 334 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 FTCDO95954 541 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 ASIC2Q16515 512 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 TMEM51Q9NW97 253 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 CETN3O15182 167 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 PPFIA4O75335 1185 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 SCNN1DP51172 638 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 GLE1Q53GS7 698 aaKnown RBP11.79□□□□□ -0.52
PSPC1-207ENST00000635251 HYIQ5T013 277 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 EMBQ6PCB8 327 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
PSPC1-207ENST00000635251 RNF14Q9UBS8 474 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms