RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 RAB33AQ14088 237 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 BORAQ6PGQ7 559 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 CEP68Q76N32 757 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 FAM124AQ86V42 546 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 NLRP10Q86W26 655 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TEX2Q8IWB9 1127 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TRIM48Q8IWZ4 208 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 CKAP2LQ8IYA6 745 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TMEM145Q8NBT3 493 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 DCAF4Q8WV16 495 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 AARSD1Q9BTE6 412 aaKnown RBP4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 BCAS3Q9H6U6 928 aa4.6□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 MROH6A6NGR9 719 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 STK10O94804 968 aaKnown RBP4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 C8BP07358 591 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 NAT1P18440 290 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 THBS2P35442 1172 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 BCL6P41182 706 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 RBM25P49756 843 aaKnown RBP4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 INHBEP58166 350 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 SMAD4Q13485 552 aaKnown RBP4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 ZC3H12BQ5HYM0 836 aaKnown RBP4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 CCDC103Q8IW40 242 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 C11orf84Q9BUA3 381 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TRIM55Q9BYV6 548 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 SMOC1Q9H4F8 434 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 DTLQ9NZJ0 730 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
NPHP3-ACAD11-202ENST00000632629 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQU0 124 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 U2SURPO15042 1029 aaKnown RBP4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TADA3O75528 432 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 FPR2P25090 351 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SURF1Q15526 300 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LONRF2Q1L5Z9 754 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 KIZQ2M2Z5 673 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ZNF585AQ6P3V2 769 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MILR1Q7Z6M3 343 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TMEM209Q96SK2 561 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 YIPF4Q9BSR8 244 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 HIRIP3Q9BW71 556 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 DEF6Q9H4E7 631 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PPP4R1LQ9P1A2 415 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MSRB2Q9Y3D2 182 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PCDHB4Q9Y5E5 795 aa4.58□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TBX1O43435 398 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CHGBP05060 677 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 RASGRF1Q13972 1273 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 STEAP3Q658P3 488 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MCTP2Q6DN12 878 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PLEKHH3Q7Z736 793 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MICAL1Q8TDZ2 1067 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CHFRQ96EP1 664 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TOE1Q96GM8 510 aaKnown RBP4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 GORASP1Q9BQQ3 440 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CCDC113Q9H0I3 377 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SLC6A20Q9NP91 592 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CLDND1Q9NY35 253 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TMEFF2Q9UIK5 374 aaPredicted RBP4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PCDHA2Q9Y5H9 948 aa4.57□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 TCRBV5S2A0A599 114 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 DLX3O60479 287 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ITGA1P56199 1179 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PURAQ00577 322 aaKnown RBP4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 R3HDM1Q15032 1099 aaKnown RBP4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PRSS53Q2L4Q9 553 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SPDYAQ5MJ70 313 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PRR31Q5SQ13 230 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SOGA3Q5TF21 947 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 STYK1Q6J9G0 422 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MAMDC2Q7Z304 686 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CELF2-AS1Q8N7Q2 184 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ZNF341Q9BYN7 854 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 RXFP1Q9HBX9 757 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 BTG4Q9NY30 223 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SIRPGQ9P1W8 387 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 MYOTQ9UBF9 498 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SIT1Q9Y3P8 196 aa4.56□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 WDR33Q9C0J8 1336 aaKnown RBP4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NPEPPSL1A6NEC2 478 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 ARNTLO00327 626 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 GPR42O15529 346 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 GPR85P60893 370 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 SPIRE1Q08AE8 756 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 IFRD2Q12894 506 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CR1LQ2VPA4 569 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 NAALADL2Q58DX5 795 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 DENND5AQ6IQ26 1287 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CD300LDQ6UXZ3 194 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 IFNL3Q8IZI9 196 aa4.55□□□□□ -1.68
NPHP3-ACAD11-202ENST00000632629 CHAMP1Q96JM3 812 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms