RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 PGK1P00558 417 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 METTL7BQ6UX53 244 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 CYFIP1Q7L576 1253 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 C4orf32Q8N8J7 132 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 GIMAP8Q8ND71 665 aaPredicted RBP18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 HAS1Q92839 578 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 FAM20AQ96MK3 541 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 MTMR9Q96QG7 549 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 TMEM60Q9H2L4 133 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 OGDHLQ9ULD0 1010 aa18.84■□□□□ 0.61
CDC42EP4-209ENST00000630622 MYADML2A6NDP7 307 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 TBX3O15119 743 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 SORBS3O60504 671 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 SGPL1O95470 568 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 GJA8P48165 433 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 KLHDC9Q8NEP7 349 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 GJA10Q969M2 543 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 RIT2Q99578 217 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 CIZ1Q9ULV3 898 aaPredicted RBP18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 TELO2Q9Y4R8 837 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 BRCA2P51587 3418 aa18.83■□□□□ 0.6
CDC42EP4-209ENST00000630622 PSMD10O75832 226 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 CST5P28325 142 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 NUCB2P80303 420 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 CALCRLQ16602 461 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 LRCH2Q5VUJ6 765 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 TNS4Q8IZW8 715 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 AFG1LQ8WV93 481 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 SDF4Q9BRK5 362 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 TMEM106CQ9BVX2 250 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 AP5M1Q9H0R1 490 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 MLXIPQ9HAP2 919 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 JPH1Q9HDC5 661 aaPredicted RBP18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 KIAA0100Q14667 2235 aaKnown RBP18.82■□□□□ 0.6
CDC42EP4-209ENST00000630622 WDR81Q562E7 1941 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 A6NJR5 290 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 CCNE2O96020 404 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 C6orf222P0C671 652 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 HOXD8P13378 290 aaPredicted RBP18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 PTGDRQ13258 359 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 LRRC41Q15345 812 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 FSCN1Q16658 493 aaKnown RBP18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 HSDL1Q3SXM5 330 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 B3GNT9Q6UX72 402 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 PPTC7Q8NI37 304 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 SPATA33Q96N06 139 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 SLC9A2Q9UBY0 812 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 VAV3Q9UKW4 847 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 CLIC4Q9Y696 253 aa18.81■□□□□ 0.6
CDC42EP4-209ENST00000630622 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 GAS7O60861 476 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 OR52Z1P0C646 297 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 BEX3Q00994 111 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 CCSAPQ6IQ19 270 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 USP28Q96RU2 1077 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 GPR20Q99678 358 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 SPC25Q9HBM1 224 aa18.8■□□□□ 0.6
CDC42EP4-209ENST00000630622 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 MMP3P08254 477 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 MNX1P50219 401 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 CPT1AP50416 773 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 SP4Q02446 784 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 SF3A1Q15459 793 aaKnown RBP18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 GNASQ5JWF2 1037 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 ZNF746Q6NUN9 644 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 RNF180Q86T96 592 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 ARRDC4Q8NCT1 418 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 TEKT3Q9BXF9 490 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
CDC42EP4-209ENST00000630622 ELP1O95163 1332 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 LAD1O00515 517 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 ATG7O95352 703 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 TFRCP02786 760 aaKnown RBP18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 CAPN2P17655 700 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 ACTR2P61160 394 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 KRT76Q01546 638 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 SPIRE1Q08AE8 756 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 PPP2R5CQ13362 524 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 PTPAQ15257 358 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 FOXD4L6Q3SYB3 417 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 FOXD4L3Q6VB84 417 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 TTC12Q9H892 705 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 POLR3EQ9NVU0 708 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 TCHHQ07283 1943 aa18.78■□□□□ 0.6
CDC42EP4-209ENST00000630622 DNM1LO00429 736 aa18.77■□□□□ 0.6
CDC42EP4-209ENST00000630622 NOP56O00567 594 aaKnown RBP18.77■□□□□ 0.6
CDC42EP4-209ENST00000630622 MARCH6O60337 910 aa18.77■□□□□ 0.6
CDC42EP4-209ENST00000630622 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
CDC42EP4-209ENST00000630622 BMP15O95972 392 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms