RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 ZNF654Q8IZM8 581 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 IGDCC4Q8TDY8 1250 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 SEPT8Q92599 483 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 ZFP91Q96JP5 570 aaPredicted RBP12.87□□□□□ -0.35
CCDC163-208ENST00000629670 CDHR1Q96JP9 859 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
CCDC163-208ENST00000629670 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
CCDC163-208ENST00000629670 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
CCDC163-208ENST00000629670 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
CCDC163-208ENST00000629670 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 ERVK-21P61565 698 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 MRPS9P82933 396 aaKnown RBP12.86□□□□□ -0.35
CCDC163-208ENST00000629670 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
CCDC163-208ENST00000629670 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
CCDC163-208ENST00000629670 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 DBF4BQ8NFT6 615 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 MTUS1Q9ULD2 1270 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 FRMPD4Q14CM0 1322 aa12.86□□□□□ -0.35
CCDC163-208ENST00000629670 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 PRC1O43663 620 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
CCDC163-208ENST00000629670 KRT40Q6A162 431 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 TRAF7Q6Q0C0 670 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 SYNE3Q6ZMZ3 975 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
CCDC163-208ENST00000629670 WNT8BQ93098 351 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 GPR20Q99678 358 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 C1QTNF1Q9BXJ1 281 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 RNPEPQ9H4A4 650 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
CCDC163-208ENST00000629670 TRIP12Q14669 1992 aaPredicted RBP12.85□□□□□ -0.35
CCDC163-208ENST00000629670 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 TREHO43280 583 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 COL9A1P20849 921 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 KCNQ1P51787 676 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 ANTXR2P58335 489 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 SP4Q02446 784 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 MBTPS1Q14703 1052 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 PTPROQ16827 1216 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC163-208ENST00000629670 RSPH3Q86UC2 560 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 TET1Q8NFU7 2136 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 APBB2Q92870 758 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 NRCAMQ92823 1304 aa12.84□□□□□ -0.35
CCDC163-208ENST00000629670 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
CCDC163-208ENST00000629670 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 LPXNO60711 386 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 CTSHP09668 335 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 HOXC8P31273 242 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 LIFRP42702 1097 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 HIC1Q14526 733 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 TNPO1Q92973 898 aaKnown RBP12.83□□□□□ -0.36
CCDC163-208ENST00000629670 GPRASP2Q96D09 838 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
CCDC163-208ENST00000629670 NCOR1O75376 2440 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 MYH7BA7E2Y1 1941 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 SH2B2O14492 632 aaPredicted RBP12.82□□□□□ -0.36
CCDC163-208ENST00000629670 MEIS2O14770 477 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 MAFGO15525 162 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 UPP2O95045 317 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
CCDC163-208ENST00000629670 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
CCDC163-208ENST00000629670 SEMA3FQ13275 785 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 SEPT1Q8WYJ6 367 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 GLG1Q92896 1179 aa12.82□□□□□ -0.36
CCDC163-208ENST00000629670 NECAB3Q96P71 396 aaPredicted RBP12.82□□□□□ -0.36
CCDC163-208ENST00000629670 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
CCDC163-208ENST00000629670 TRANK1O15050 2925 aa12.81□□□□□ -0.36
CCDC163-208ENST00000629670 SLC27A2O14975 620 aa12.81□□□□□ -0.36
CCDC163-208ENST00000629670 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
CCDC163-208ENST00000629670 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
CCDC163-208ENST00000629670 TCF7P36402 384 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms