RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 VSIG10LQ86VR7 867 aa16.51■□□□□ 0.23
CDK7-215ENST00000629350 CCDC82Q8N4S0 544 aa16.51■□□□□ 0.23
CDK7-215ENST00000629350 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
CDK7-215ENST00000629350 WNT8BQ93098 351 aa16.51■□□□□ 0.23
CDK7-215ENST00000629350 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
CDK7-215ENST00000629350 MYO9BQ13459 2157 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
CDK7-215ENST00000629350 MEIS2O14770 477 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 ZEB2O60315 1214 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 EIF3JO75822 258 aaKnown RBP16.5■□□□□ 0.23
CDK7-215ENST00000629350 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 LIFRP42702 1097 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 GDF6Q6KF10 455 aaPredicted RBP16.5■□□□□ 0.23
CDK7-215ENST00000629350 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 SGMS1Q86VZ5 419 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 CTCFLQ8NI51 663 aaPredicted RBP16.5■□□□□ 0.23
CDK7-215ENST00000629350 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 MAF1Q9H063 256 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
CDK7-215ENST00000629350 MRVI1Q9Y6F6 885 aa16.5■□□□□ 0.23
CDK7-215ENST00000629350 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
CDK7-215ENST00000629350 SMAD3P84022 425 aaKnown RBP16.49■□□□□ 0.23
CDK7-215ENST00000629350 PPIGQ13427 754 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK7-215ENST00000629350 TCTN1Q2MV58 587 aa16.49■□□□□ 0.23
CDK7-215ENST00000629350 HSDL1Q3SXM5 330 aa16.49■□□□□ 0.23
CDK7-215ENST00000629350 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
CDK7-215ENST00000629350 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
CDK7-215ENST00000629350 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
CDK7-215ENST00000629350 GGPS1O95749 300 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 HOXD8P13378 290 aaPredicted RBP16.48■□□□□ 0.23
CDK7-215ENST00000629350 CDC27P30260 824 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
CDK7-215ENST00000629350 GPNMBQ14956 572 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 KCNB2Q92953 911 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
CDK7-215ENST00000629350 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
CDK7-215ENST00000629350 MTA3Q9BTC8 594 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 SNX14Q9Y5W7 946 aa16.48■□□□□ 0.23
CDK7-215ENST00000629350 COL4A4P53420 1690 aaPredicted RBP16.47■□□□□ 0.23
CDK7-215ENST00000629350 F2P00734 622 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 DNAJB2P25686 324 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 CCND2P30279 289 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
CDK7-215ENST00000629350 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 NFRKBQ6P4R8 1299 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 OTOP2Q7RTS6 562 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 TRIM50Q86XT4 487 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 TMEM199Q8N511 208 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 PPTC7Q8NI37 304 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 INPP4AQ96PE3 977 aaPredicted RBP16.47■□□□□ 0.23
CDK7-215ENST00000629350 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
CDK7-215ENST00000629350 XIRP2A4UGR9 3374 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 B4DLN1 442 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 HAS3O00219 553 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 KIF5BP33176 963 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 MRPL12P52815 198 aaKnown RBP16.46■□□□□ 0.23
CDK7-215ENST00000629350 ZNF697Q5TEC3 545 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 CDX2Q99626 313 aaPredicted RBP16.46■□□□□ 0.23
CDK7-215ENST00000629350 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 PBX4Q9BYU1 374 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
CDK7-215ENST00000629350 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.23
CDK7-215ENST00000629350 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 HSPA4P34932 840 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 PSRC1Q6PGN9 363 aaPredicted RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 TRAF7Q6Q0C0 670 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 DEFB128Q7Z7B8 93 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 DHX37Q8IY37 1157 aaKnown RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 C16orf70Q9BSU1 422 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 OSBPL7Q9BZF2 842 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
CDK7-215ENST00000629350 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
CDK7-215ENST00000629350 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 ARHGEF15O94989 841 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 MYOGP15173 224 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 RABGGTBP53611 331 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 MBTPS1Q14703 1052 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 GRIN2CQ14957 1233 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
CDK7-215ENST00000629350 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms