RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 SLC37A4O43826 429 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 CCNT1O60563 726 aaKnown RBP11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 INHAP05111 366 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 TRIM32Q13049 653 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 MTMR1Q13613 665 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 ATL3Q6DD88 541 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 SENP7Q9BQF6 1050 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 KCNH7Q9NS40 1196 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 DDX25Q9UHL0 483 aaKnown RBP11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
SOX2-OT-249ENST00000628810 LAD1O00515 517 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 SEPT4O43236 478 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 NEMFO60524 1076 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 BMP15O95972 392 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 NUDT7P0C024 238 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 AKR1A1P14550 325 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 KCNA2P16389 499 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 ZNF76P36508 570 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 NBR1Q14596 966 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 PRR16Q569H4 304 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 IQSEC1Q6DN90 963 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 EEPD1Q7L9B9 569 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 PLA2G4DQ86XP0 818 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 C4orf32Q8N8J7 132 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 SLC5A5Q92911 643 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 WDR11Q9BZH6 1224 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 AGO4Q9HCK5 861 aaKnown RBP11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 ZHX1Q9UKY1 873 aaPredicted RBP11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 FRMPD3Q5JV73 1810 aa11.16□□□□□ -0.62
SOX2-OT-249ENST00000628810 NFASCO94856 1347 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 MSH4O15457 936 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ADCY6O43306 1168 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ARIH2O95376 493 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ARP10275 920 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 MCM7P33993 719 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 NKX3-2P78367 333 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ATP2C1P98194 919 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 SLC9C1Q4G0N8 1177 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 SEPT14Q6ZU15 432 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 PLPP6Q8IY26 295 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 SH3TC2Q8TF17 1288 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 FAM20AQ96MK3 541 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 MTMR9Q96QG7 549 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 USP28Q96RU2 1077 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 PDGFCQ9NRA1 345 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 MRVI1Q9Y6F6 885 aa11.15□□□□□ -0.62
SOX2-OT-249ENST00000628810 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 IPO5O00410 1097 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 DHX15O43143 795 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ATP9AO75110 1047 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 PSMD10O75832 226 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 YEATS4O95619 227 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 SMPD1P17405 629 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 CCND3P30281 292 aaPredicted RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 PRPHP41219 470 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 SP2Q02086 613 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 NEDD9Q14511 834 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 PTPAQ15257 358 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ZNF174Q15697 407 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 CALCRLQ16602 461 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ANO1Q5XXA6 986 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ARL6IP4Q66PJ3 421 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 METTL7BQ6UX53 244 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 B3GNT9Q6UX72 402 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 SLFN12Q8IYM2 578 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 HAS1Q92839 578 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ZNF333Q96JL9 665 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 RIT2Q99578 217 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 ZNF577Q9BSK1 485 aa11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
SOX2-OT-249ENST00000628810 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms