RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KIAA1217Q5T5P2 1943 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 A6NJR5 290 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 ARVCFO00192 962 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 FIBPO43427 364 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 CABYRO75952 493 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 CYP3A4P08684 503 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 PURAQ00577 322 aaKnown RBP16.72■□□□□ 0.27
PNKP-221ENST00000627317 CEP55Q53EZ4 464 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 CRYGNQ8WXF5 182 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 COPS5Q92905 334 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 GPRASP2Q96D09 838 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 CDHR1Q96JP9 859 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 UBE2OQ9C0C9 1292 aaKnown RBP16.72■□□□□ 0.27
PNKP-221ENST00000627317 PRDM5Q9NQX1 630 aaPredicted RBP16.72■□□□□ 0.27
PNKP-221ENST00000627317 UBIAD1Q9Y5Z9 338 aa16.72■□□□□ 0.27
PNKP-221ENST00000627317 MROH7Q68CQ1 1323 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 CD4P01730 458 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 TXNP10599 105 aaKnown RBP16.71■□□□□ 0.27
PNKP-221ENST00000627317 SYT1P21579 422 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 USP11P51784 963 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 ARHGAP1Q07960 439 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 MTMR1Q13613 665 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 LETM2Q2VYF4 491 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 LRIT3Q3SXY7 679 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 KCNV1Q6PIU1 500 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 NEK8Q86SG6 692 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 NOSTRINQ8IVI9 506 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 BADQ92934 168 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
PNKP-221ENST00000627317 PRKAG2Q9UGJ0 569 aa16.71■□□□□ 0.27
PNKP-221ENST00000627317 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 KIF28PB7ZC32 967 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 ITGB5P18084 799 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 CPT1AP50416 773 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 PSMC6P62333 389 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 EARS2Q5JPH6 523 aaKnown RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 NIPA1Q7RTP0 329 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 EMID1Q96A84 441 aaPredicted RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 NAP1L4Q99733 375 aaKnown RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 LBHD1Q9BQE6 289 aaPredicted RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
PNKP-221ENST00000627317 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
PNKP-221ENST00000627317 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 STX6O43752 255 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 ZEB2O60315 1214 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 TGFB3P10600 412 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
PNKP-221ENST00000627317 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
PNKP-221ENST00000627317 ICAM3P32942 547 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 CIITAP33076 1130 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 ITGA7Q13683 1181 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 PRR16Q569H4 304 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 SEZ6LQ9BYH1 1024 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 TMEM39AQ9NV64 488 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
PNKP-221ENST00000627317 NOL7Q9UMY1 257 aaKnown RBP16.69■□□□□ 0.26
PNKP-221ENST00000627317 MEIS1O00470 390 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 TDP2O95551 362 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 GH1P01241 217 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 HOXD8P13378 290 aaPredicted RBP16.68■□□□□ 0.26
PNKP-221ENST00000627317 UBA1P22314 1058 aaKnown RBP16.68■□□□□ 0.26
PNKP-221ENST00000627317 EPHB4P54760 987 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 SEMA3FQ13275 785 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 MOXD1Q6UVY6 613 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 CYP2W1Q8TAV3 490 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 LRCH3Q96II8 777 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 KCNH7Q9NS40 1196 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 PKD2L1Q9P0L9 805 aa16.68■□□□□ 0.26
PNKP-221ENST00000627317 DDX25Q9UHL0 483 aaKnown RBP16.68■□□□□ 0.26
PNKP-221ENST00000627317 IGLV3-22A0A075B6J6 115 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 MAFGO15525 162 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 CCNT1O60563 726 aaKnown RBP16.67■□□□□ 0.26
PNKP-221ENST00000627317 GGPS1O95749 300 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 TIMP1P01033 207 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
PNKP-221ENST00000627317 ATP2B1P20020 1258 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 NEDD9Q14511 834 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 C9orf50Q5SZB4 431 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 AFG1LQ8WV93 481 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 VTI1AQ96AJ9 217 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
PNKP-221ENST00000627317 MTMR6Q9Y217 621 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 SCN10AQ9Y5Y9 1956 aa16.67■□□□□ 0.26
PNKP-221ENST00000627317 CYP3A7-CYP3A51PA0A087WV96 503 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 EDIL3O43854 480 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 SORBS3O60504 671 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 B4GALT4O60513 344 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 KPNA6O60684 536 aa16.66■□□□□ 0.26
PNKP-221ENST00000627317 MMP3P08254 477 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms