RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 NTRK3Q16288 839 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 LONRF2Q1L5Z9 754 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 SV2CQ496J9 727 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 NPM2Q86SE8 214 aaKnown RBP4.73□□□□□ -1.65
CDKL5-208ENST00000624953 NUP43Q8NFH3 380 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 GPRC5CQ9NQ84 441 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 SNTG2Q9NY99 539 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDKL5-208ENST00000624953 CLEC1BQ9P126 229 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 X6R8D5 127 aa4.73□□□□□ -1.65
CDKL5-208ENST00000624953 ADAMTS13Q76LX8 1427 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 PTPRUQ92729 1446 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 ERBINQ96RT1 1412 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 TRPM2O94759 1503 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 IQGAP3Q86VI3 1631 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 SPHKAPQ2M3C7 1700 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 OR14I1A6ND48 311 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 KCNA6P17658 529 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 MAPKAPK2P49137 400 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 CYP4F8P98187 520 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 PKN1Q16512 942 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 SOGA3Q5TF21 947 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 IQCEQ6IPM2 695 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 RPTNQ6XPR3 784 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 RIOX2Q8IUF8 465 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 NETO2Q8NC67 525 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 TSPAN17Q96FV3 270 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
CDKL5-208ENST00000624953 CNTD2Q9H8S5 307 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 KCNK12Q9HB15 430 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 FBXL7Q9UJT9 491 aa4.72□□□□□ -1.65
CDKL5-208ENST00000624953 MSH6P52701 1360 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 NPHP3-ACAD11A0A0J9YXS1 232 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 ABLIM1O14639 778 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 DIAPH1O60610 1272 aaKnown RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 C6orf222P0C671 652 aaPredicted RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 CFPP27918 469 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 VIPR1P32241 457 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 GTF2F1P35269 517 aaKnown RBP eCLIP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 IDI1Q13907 227 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 NR1I3Q14994 352 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PRSS53Q2L4Q9 553 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PLEKHN1Q494U1 663 aaPredicted RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PAQR3Q6TCH7 311 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 MPZL3Q6UWV2 235 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 RSPO2Q6UXX9 243 aaPredicted RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 LRRC47Q8N1G4 583 aaKnown RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 NAT16Q8N8M0 369 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 RCBTB1Q8NDN9 531 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 KISS1RQ969F8 398 aaPredicted RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 DEPDC7Q96QD5 511 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 DIRC2Q96SL1 478 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PPP1R16BQ96T49 567 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 AARSD1Q9BTE6 412 aaKnown RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 SPATA9Q9BWV2 254 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 TRIM55Q9BYV6 548 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 DCP1AQ9NPI6 582 aaPredicted RBP4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PCDHA5Q9Y5H7 936 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 ABCC5O15440 1437 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 SPATA31A6Q5VVP1 1343 aa4.71□□□□□ -1.66
CDKL5-208ENST00000624953 PLCH1Q4KWH8 1693 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 GLI3P10071 1580 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 KIF15Q9NS87 1388 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 PLEKHG1Q9ULL1 1385 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 TNS1Q9HBL0 1735 aaKnown RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 IQCA1LA6NCM1 817 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 ETV2O00321 342 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 MPOP05164 745 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 PABPC1P11940 636 aaKnown RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 LTBRP36941 435 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 ARL4AP40617 200 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 SLC6A11P48066 632 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 DLG4P78352 724 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 CAP1Q01518 475 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 HSP90AA2PQ14568 343 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 HABP4Q5JVS0 413 aaKnown RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 ADGRF1Q5T601 910 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 YOD1Q5VVQ6 348 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 FOXB2Q5VYV0 432 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 LCNL1Q6ZST4 164 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 CPNE8Q86YQ8 564 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 IGDCC3Q8IVU1 814 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 ZBTB38Q8NAP3 1195 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 UBXN4Q92575 508 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 SLC38A3Q99624 504 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 EPB41L4AQ9HCS5 686 aaPredicted RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 GPR27Q9NS67 375 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 R3HCC1Q9Y3T6 440 aaKnown RBP4.7□□□□□ -1.66
CDKL5-208ENST00000624953 MST1RQ04912 1400 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 MYOM3Q5VTT5 1437 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 SETD5Q9C0A6 1442 aa4.7□□□□□ -1.66
CDKL5-208ENST00000624953 WNT9AO14904 365 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 N4BP3O15049 544 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 NPHS1O60500 1241 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 SNRPB2P08579 225 aaKnown RBP4.69□□□□□ -1.66
CDKL5-208ENST00000624953 C1QTNF9P0C862 333 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 SDHBP21912 280 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 CDR1P51861 262 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 EMC4Q5J8M3 183 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms