RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PCDHA6Q9UN73 950 aa18.36■□□□□ 0.53
DDB2-216ENST00000622878 PCDHA8Q9Y5H6 950 aa18.36■□□□□ 0.53
DDB2-216ENST00000622878 UBIAD1Q9Y5Z9 338 aa18.36■□□□□ 0.53
DDB2-216ENST00000622878 VCANP13611 3396 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 hCG_1984214I3L0E3 225 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 STXBP3O00186 592 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 ATP9AO75110 1047 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 LGALS2P05162 132 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 TRIM71Q2Q1W2 868 aaKnown RBP18.35■□□□□ 0.53
DDB2-216ENST00000622878 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 NLRX1Q86UT6 975 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 ZNF713Q8N859 430 aaPredicted RBP18.35■□□□□ 0.53
DDB2-216ENST00000622878 RETREG2Q8NC44 543 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 GPRASP2Q96D09 838 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
DDB2-216ENST00000622878 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
DDB2-216ENST00000622878 SPDYE3A6NKU9 549 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 H3BRB1 525 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 KCNA2P16389 499 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 METAP2P50579 478 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDB2-216ENST00000622878 NAPAP54920 295 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 EVCP57679 992 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 ZNF200P98182 395 aaPredicted RBP18.34■□□□□ 0.53
DDB2-216ENST00000622878 PTK7Q13308 1070 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 ERICH6BQ5W0A0 696 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 TRAF7Q6Q0C0 670 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 CCDC155Q8N6L0 562 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 WNT8BQ93098 351 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 TIFAQ96CG3 184 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
DDB2-216ENST00000622878 TUT1Q9H6E5 874 aaKnown RBP18.34■□□□□ 0.53
DDB2-216ENST00000622878 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.52
DDB2-216ENST00000622878 CKBP12277 381 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 SELPP16109 830 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 PSMA5P28066 241 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 CLK2P49760 499 aaKnown RBP18.33■□□□□ 0.52
DDB2-216ENST00000622878 FGD1P98174 961 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 GRIN2CQ14957 1233 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
DDB2-216ENST00000622878 GIMAP8Q8ND71 665 aaPredicted RBP18.33■□□□□ 0.52
DDB2-216ENST00000622878 CDHR1Q96JP9 859 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 ZNF576Q9H609 170 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 JADE2Q9NQC1 790 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 REV3LO60673 3130 aa18.33■□□□□ 0.52
DDB2-216ENST00000622878 CCDC196A0A1B0GTZ2 297 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 SMCO2A6NFE2 343 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 ADCY7P51828 1080 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 NTRK3Q16288 839 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 PKN1Q16512 942 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 LRRC8DQ7L1W4 858 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 SERINC5Q86VE9 423 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 MYLIPQ8WY64 445 aa18.32■□□□□ 0.52
DDB2-216ENST00000622878 YBX2Q9Y2T7 364 aaKnown RBP18.32■□□□□ 0.52
DDB2-216ENST00000622878 PTPRSQ13332 1948 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 MAFGO15525 162 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 FOSP01100 380 aaPredicted RBP18.31■□□□□ 0.52
DDB2-216ENST00000622878 CXCL10P02778 98 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 SMIM10L2AP0DMW4 78 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 SMIM10L2BP0DMW5 78 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 MTMR1Q13613 665 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 RAB30Q15771 203 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 TRIM50Q86XT4 487 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 CYP2W1Q8TAV3 490 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
DDB2-216ENST00000622878 NAP1L2Q9ULW6 460 aaPredicted RBP18.31■□□□□ 0.52
DDB2-216ENST00000622878 SPTBN5Q9NRC6 3674 aaKnown RBP18.31■□□□□ 0.52
DDB2-216ENST00000622878 GSTTP1A0A1W2PQM5 241 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 ADAMTS3O15072 1205 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 PRPF3O43395 683 aaKnown RBP18.3■□□□□ 0.52
DDB2-216ENST00000622878 NBNO60934 754 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 PARNO95453 639 aaKnown RBP18.3■□□□□ 0.52
DDB2-216ENST00000622878 ACTN1P12814 892 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 SCG2P13521 617 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 PDIA3P30101 505 aaKnown RBP18.3■□□□□ 0.52
DDB2-216ENST00000622878 ADAM17P78536 824 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 TOB2Q14106 344 aaPredicted RBP18.3■□□□□ 0.52
DDB2-216ENST00000622878 MBTPS1Q14703 1052 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 SLC17A8Q8NDX2 589 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 MXRA8Q9BRK3 442 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 ANO3Q9BYT9 981 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 GLT8D2Q9H1C3 349 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 TMEM260Q9NX78 707 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 MSRAQ9UJ68 235 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 CUL9Q8IWT3 2517 aa18.3■□□□□ 0.52
DDB2-216ENST00000622878 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 C17orf102A2RUQ5 167 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 ZBBXA8MT70 800 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 TREHO43280 583 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 ATP2A2P16615 1042 aaKnown RBP18.29■□□□□ 0.52
DDB2-216ENST00000622878 SREBF1P36956 1147 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 RABGGTBP53611 331 aa18.29■□□□□ 0.52
DDB2-216ENST00000622878 SP4Q02446 784 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms