RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 SHHQ15465 462 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 FAM177A1Q8N128 213 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 CAGE1Q8TC20 777 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 ZMYND12Q9H0C1 365 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 H3BRB1 525 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 ACTN1P12814 892 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 RFC2P35250 354 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 SP4Q02446 784 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 WASF1Q92558 559 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
CBWD3-218ENST00000622755 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
CBWD3-218ENST00000622755 FGBP02675 491 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 LGALS2P05162 132 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 CYP2C9P11712 490 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 CSF2RAP15509 400 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 ITGB8P26012 769 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 SREBF1P36956 1147 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 CCL23P55773 120 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-218ENST00000622755 SP2Q02086 613 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
CBWD3-218ENST00000622755 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 AZI2Q9H6S1 392 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
CBWD3-218ENST00000622755 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-218ENST00000622755 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 TYW1BQ6NUM6 668 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 GLG1Q92896 1179 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 GPR20Q99678 358 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-218ENST00000622755 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
CBWD3-218ENST00000622755 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 ITGB5P18084 799 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 TCF7P36402 384 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 NEK4P51957 841 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 PTK7Q13308 1070 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 NTRK3Q16288 839 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 C9orf50Q5SZB4 431 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 ZNF697Q5TEC3 545 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 NIPA1Q7RTP0 329 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 KAT2BQ92831 832 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 PGBD1Q96JS3 809 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 FTOQ9C0B1 505 aaKnown RBP eCLIP14.04□□□□□ -0.16
CBWD3-218ENST00000622755 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 VPS54Q9P1Q0 977 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
CBWD3-218ENST00000622755 NFASCO94856 1347 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 DOCK5Q9H7D0 1870 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 ZBBXA8MT70 800 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 HAS3O00219 553 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 KCNA2P16389 499 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 PKN1Q16512 942 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 GDF6Q6KF10 455 aaPredicted RBP14.03□□□□□ -0.16
CBWD3-218ENST00000622755 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
CBWD3-218ENST00000622755 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
CBWD3-218ENST00000622755 BRMS1Q9HCU9 246 aa14.03□□□□□ -0.16
CBWD3-218ENST00000622755 PFKFB2O60825 505 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 RPLP2P05387 115 aaKnown RBP14.02□□□□□ -0.16
CBWD3-218ENST00000622755 ACRP10323 421 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 AK2P54819 239 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 PLCB2Q00722 1185 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 TRIM29Q14134 588 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 TMEM240Q5SV17 173 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 DEFB123Q8N688 67 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 SCLYQ96I15 445 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.16
CBWD3-218ENST00000622755 STK36Q9NRP7 1315 aa14.02□□□□□ -0.17
CBWD3-218ENST00000622755 KAT6AQ92794 2004 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms