RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 IRF9Q00978 393 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 MCL1Q07820 350 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 EMC4Q5J8M3 183 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 NOL8Q76FK4 1167 aaKnown RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 NUP43Q8NFH3 380 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 UHMK1Q8TAS1 419 aaKnown RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 SLC5A5Q92911 643 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 PLCD4Q9BRC7 762 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 H2AFY2Q9P0M6 372 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-213ENST00000622183 DSEQ9UL01 958 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 SRPK3Q9UPE1 567 aa6.65□□□□□ -1.34
CPNE3-213ENST00000622183 GABRDO14764 452 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 PRKCAP17252 672 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 TACR1P25103 407 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SLC6A11P48066 632 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 NFE2Q16621 373 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-213ENST00000622183 CYP4F22Q6NT55 531 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 FMNL3Q8IVF7 1028 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 NOSTRINQ8IVI9 506 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 RAVER1Q8IY67 606 aaKnown RBP6.64□□□□□ -1.35
CPNE3-213ENST00000622183 FLCNQ8NFG4 579 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SH3RF2Q8TEC5 729 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SMAD5Q99717 465 aaKnown RBP6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SP110Q9HB58 689 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 PAK6Q9NQU5 681 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-213ENST00000622183 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SPEF1Q9Y4P9 236 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 SPO11Q9Y5K1 396 aa6.64□□□□□ -1.35
CPNE3-213ENST00000622183 TGM5O43548 720 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 MAFKO60675 156 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 KRT37O76014 449 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 EFEMP2O95967 443 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 HPXP02790 462 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 NTRK1P04629 796 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 ERVK-21P61565 698 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 KIR3DS1Q14943 382 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 ZNF174Q15697 407 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 CHRNA2Q15822 529 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 DDB1Q16531 1140 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 HSP90AB2PQ58FF8 381 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 STEAP3Q658P3 488 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 FSTL4Q6MZW2 842 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 EP400NLQ6ZTU2 488 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 HDGFL2Q7Z4V5 671 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-213ENST00000622183 CABP7Q86V35 215 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 PASD1Q8IV76 773 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 CLRN3Q8NCR9 226 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 CHMP4CQ96CF2 233 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 YIPF4Q9BSR8 244 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 C19orf73Q9NVV2 129 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 ANGEL1Q9UNK9 670 aaKnown RBP6.63□□□□□ -1.35
CPNE3-213ENST00000622183 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
CPNE3-213ENST00000622183 A0A1W2PQJ5 194 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 DVL2O14641 736 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 KCNK3O14649 394 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
CPNE3-213ENST00000622183 HIP1RO75146 1068 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 FBXO21O94952 628 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 GLI4P10075 376 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 GDNFP39905 211 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 PHC1P78364 1004 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 NLRX1Q86UT6 975 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 DCP2Q8IU60 420 aaKnown RBP6.62□□□□□ -1.35
CPNE3-213ENST00000622183 KIAA1958Q8N8K9 716 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 NETO2Q8NC67 525 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 DLG3Q92796 817 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 CD244Q9BZW8 370 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 VTA1Q9NP79 307 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
CPNE3-213ENST00000622183 HGSO14964 777 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 TADA3O75528 432 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SLC9A1P19634 815 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 ITGB7P26010 798 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SSTR4P31391 388 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 GJA4P35212 333 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 RAB27AP51159 221 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 KIF11P52732 1056 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 EPHA5P54756 1037 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SMAD3P84022 425 aaKnown RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 CYP4F8P98187 520 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SNX17Q15036 470 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 TERF2Q15554 542 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SMAD2Q15796 467 aaKnown RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 INAVAQ3KP66 663 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 RGL3Q3MIN7 710 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 BROXQ5VW32 411 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 BICRALQ6AI39 1079 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 KCTD1Q719H9 257 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 LILRA2Q8N149 483 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 CBARPQ8N350 705 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 PHOSPHO1Q8TCT1 267 aa6.61□□□□□ -1.35
CPNE3-213ENST00000622183 AHCYL2Q96HN2 611 aaKnown RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 ELF4Q99607 663 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 PDGFDQ9GZP0 370 aaPredicted RBP6.61□□□□□ -1.35
CPNE3-213ENST00000622183 SMOC1Q9H4F8 434 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms