RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CCDC196A0A1B0GTZ2 297 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 SMCO2A6NFE2 343 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 H3BRB1 525 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 NOP56O00567 594 aaKnown RBP20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 LGALS2P05162 132 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 DNAJB2P25686 324 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 PBX2P40425 430 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 PPP1R18Q6NYC8 613 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 RUFY3Q7L099 469 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 GPRASP2Q96D09 838 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 TUT1Q9H6E5 874 aaKnown RBP20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 ZSWIM6Q9HCJ5 1215 aa20.58■□□□□ 0.89
SCAMP4-213ENST00000621748 NID2Q14112 1375 aa20.58■□□□□ 0.88
SCAMP4-213ENST00000621748 hCG_1984214I3L0E3 225 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 KCNA2P16389 499 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 ADCY7P51828 1080 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 PFKFB3Q16875 520 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 ZNF713Q8N859 430 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 CAGE1Q8TC20 777 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 CDX2Q99626 313 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 PBX4Q9BYU1 374 aa20.57■□□□□ 0.88
SCAMP4-213ENST00000621748 GBF1Q92538 1859 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 PFKMP08237 780 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 PDIA3P30101 505 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 RFC2P35250 354 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 EVCP57679 992 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 SP4Q02446 784 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 TOB2Q14106 344 aaPredicted RBP20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 GPNMBQ14956 572 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 AFAP1L1Q8TED9 768 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 WNT8BQ93098 351 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 CDHR1Q96JP9 859 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 MTIF3Q9H2K0 278 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 JADE2Q9NQC1 790 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 TMEM260Q9NX78 707 aa20.56■□□□□ 0.88
SCAMP4-213ENST00000621748 TMEM265A0A087WTH1 108 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 RBAK-RBAKDNI3L0D1 243 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 ADAMTS3O15072 1205 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 SCG2P13521 617 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 CLK2P49760 499 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 RBL2Q08999 1139 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 PTK7Q13308 1070 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 MTMR1Q13613 665 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 NTRK3Q16288 839 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 PKN1Q16512 942 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 TRIM71Q2Q1W2 868 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 TRIM50Q86XT4 487 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 CCDC155Q8N6L0 562 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 GIMAP8Q8ND71 665 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 CYP2W1Q8TAV3 490 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 PHKBQ93100 1093 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 TIFAQ96CG3 184 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 ANO3Q9BYT9 981 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 EHMT1Q9H9B1 1298 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 PKD2L1Q9P0L9 805 aa20.55■□□□□ 0.88
SCAMP4-213ENST00000621748 ZBBXA8MT70 800 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 PRPF3O43395 683 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 PPFIA3O75145 1194 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 FOSP01100 380 aaPredicted RBP20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 SMIM10L2AP0DMW4 78 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 SMIM10L2BP0DMW5 78 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 CKBP12277 381 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 SELPP16109 830 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 UTP14CQ5TAP6 766 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 MXRA8Q9BRK3 442 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 TM6SF1Q9BZW5 370 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 RNPEPQ9H4A4 650 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 NCOA5Q9HCD5 579 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 SLC4A7Q9Y6M7 1214 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 KAT6AQ92794 2004 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 EYSQ5T1H1 3165 aa20.54■□□□□ 0.88
SCAMP4-213ENST00000621748 HOXC8P31273 242 aa20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 TRAF7Q6Q0C0 670 aa20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 LRRC8DQ7L1W4 858 aa20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 UPF3BQ9BZI7 483 aaKnown RBP20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 GLT8D2Q9H1C3 349 aa20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 CHD9Q3L8U1 2897 aa20.53■□□□□ 0.88
SCAMP4-213ENST00000621748 GSTTP1A0A1W2PQM5 241 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 C17orf102A2RUQ5 167 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 MAFGO15525 162 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 TCF7P36402 384 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 RABGGTBP53611 331 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 GRIN2CQ14957 1233 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 SERINC5Q86VE9 423 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 MYLIPQ8WY64 445 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 ZMYND12Q9H0C1 365 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 ZNF576Q9H609 170 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 KCNH7Q9NS40 1196 aa20.52■□□□□ 0.88
SCAMP4-213ENST00000621748 ESYT2A0FGR8 921 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 TREHO43280 583 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 NBNO60934 754 aa20.51■□□□□ 0.87
SCAMP4-213ENST00000621748 ARP10275 920 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms