RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 DHTKD1Q96HY7 919 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 BAIAP2L1Q9UHR4 511 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 ARFGEF2Q9Y6D5 1785 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 GCOM1H8Y6P7 765 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 MYZAPP0CAP1 466 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 CALM1P0DP23 149 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 CALM2P0DP24 149 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 CALM3P0DP25 149 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 LLGL1Q15334 1064 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 TBC1D9BQ66K14 1250 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PNMA8AQ86V59 439 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 ZNF512BQ96KM6 892 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 ATP6V1G3Q96LB4 118 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 PYM1Q9BRP8 204 aaKnown RBP7.63□□□□□ -1.19
NEDD9-216ENST00000620854 SLC24A3Q9HC58 644 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 SLC40A1Q9NP59 571 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 KBTBD4Q9NVX7 518 aa7.63□□□□□ -1.19
NEDD9-216ENST00000620854 POTEMA6NI47 508 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CALML3P27482 149 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PRDX5P30044 214 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CDC25CP30307 473 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 GBP2P32456 591 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 FLT3P36888 993 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 FNTAP49354 379 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 GNAQP50148 359 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 MKRN4PQ13434 485 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 KSR1Q8IVT5 923 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CNPY4Q8N129 248 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PAF1Q8N7H5 531 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PCDHA6Q9UN73 950 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PCDHA4Q9UN74 947 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PCDHA8Q9Y5H6 950 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PPEF1O14829 653 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 KLRK1P26718 216 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 COPB2P35606 906 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 ITPK1Q13572 414 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PPP2R5BQ15173 497 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 NBPF9Q3BBW0 867 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 RC3H1Q5TC82 1133 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 ARL6IP4Q66PJ3 421 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 RETREG2Q8NC44 543 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CYFIP2Q96F07 1278 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 AMACRQ9UHK6 382 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 SAP30BPQ9UHR5 308 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 BCS1LQ9Y276 419 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PNPLA7Q6ZV29 1317 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 A0A087X0T9 212 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 DNM1LO00429 736 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 FAM228BP0C875 321 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 GRAPQ13588 217 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 NAA25Q14CX7 972 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 KRT71Q3SY84 523 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 NIM1KQ8IY84 436 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 GRAPLQ8TC17 118 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 TCP11Q8WWU5 503 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PAIP2Q9BPZ3 127 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 RIOK1Q9BRS2 568 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 LSM14BQ9BX40 385 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CELF4Q9BZC1 486 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 AKAP11Q9UKA4 1901 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 MYMKA6NI61 221 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CHUKO15111 745 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 BUB1BO60566 1050 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CLTAP09496 248 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 KRT13P13646 458 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 CETN2P41208 172 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 TRAPPC10P48553 1259 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 MAGOHP61326 146 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 SLC9C1Q4G0N8 1177 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 SV2BQ7L1I2 683 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 PIK3R5Q8WYR1 880 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 MAGOHBQ96A72 148 aaKnown RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 LRRC4CQ9HCJ2 640 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 BSDC1Q9NW68 430 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-216ENST00000620854 TMEM260Q9NX78 707 aa7.62□□□□□ -1.19
NEDD9-216ENST00000620854 TMEM110-MUSTN1A8MSY1 372 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 DAPK3O43293 454 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 TBCAO75347 108 aaKnown RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 NEBLO76041 1014 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ACTN1P12814 892 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CALRP27797 417 aaKnown RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 HSD17B3P37058 310 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SKOR1P84550 965 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 KLHL30Q0D2K2 578 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 KCNB1Q14721 858 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 PPP1R7Q15435 360 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SFMBT2Q5VUG0 894 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 HIBCHQ6NVY1 386 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CCDC84Q86UT8 332 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ERGIC2Q96RQ1 377 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 DCP1AQ9NPI6 582 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 DDX20Q9UHI6 824 aaKnown RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CEP83Q9Y592 693 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 GMNCA6NCL1 334 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SMCO2A6NFE2 343 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms