RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-222	ENST00000620505	RIOX1	Q9H6W3	641 aa		10.14	□□□□□ -0.79
TARDBP-222	ENST00000620505	TELO2	Q9Y4R8	837 aa		10.14	□□□□□ -0.79
TARDBP-222	ENST00000620505	PNMA6F	A0A0J9YX94	578 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	LPXN	O60711	386 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	PPFIA4	O75335	1185 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	CXCL10	P02778	98 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	CTSH	P09668	335 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	POU3F3	P20264	500 aa	Predicted RBP	10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	ANTXR2	P58335	489 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	SP4	Q02446	784 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	GHRHR	Q02643	423 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	IKBKE	Q14164	716 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	UTP14C	Q5TAP6	766 aa	Known RBP	10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	RAB11FIP4	Q86YS3	637 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	DBF4B	Q8NFT6	615 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	NCOA7	Q8NI08	942 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	RUFY2	Q8WXA3	655 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	ATP6V0A1	Q93050	837 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	C16orf70	Q9BSU1	422 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	OSBPL7	Q9BZF2	842 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	TRIP12	Q14669	1992 aa	Predicted RBP	10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	TET1	Q8NFU7	2136 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	PRUNE2	Q8WUY3	3088 aa		10.13	□□□□□ -0.79
TARDBP-222	ENST00000620505	COL4A4	P53420	1690 aa	Predicted RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	TCF20	Q9UGU0	1960 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	MYH7B	A7E2Y1	1941 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	C17orf102	A2RUQ5	167 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	RSPH10B2	B2RC85	870 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505		H3BRB1	525 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	NOP56	O00567	594 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	TREH	O43280	583 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	LGR5	O75473	907 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	GJB5	O95377	273 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	LGALS2	P05162	132 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	RSPH10B	P0C881	870 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	SMIM10L2A	P0DMW4	78 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	SMIM10L2B	P0DMW5	78 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	HOXD8	P13378	290 aa	Predicted RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	MRPS9	P82933	396 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	RBL2	Q08999	1139 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	TROAP	Q12815	778 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	SART3	Q15020	963 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	AAK1	Q2M2I8	961 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	KCNV1	Q6PIU1	500 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	USP17L6P	Q6QN14	398 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	CYFIP1	Q7L576	1253 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	CATIP	Q7Z7H3	387 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	TRIM50	Q86XT4	487 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	MYOCD	Q8IZQ8	938 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	RAD9A	Q99638	391 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	C17orf80	Q9BSJ5	609 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	TUT1	Q9H6E5	874 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	SUGCT	Q9HAC7	445 aa		10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	MAP3K20	Q9NYL2	800 aa	Known RBP	10.12	□□□□□ -0.79
TARDBP-222	ENST00000620505	LINC01553	A4QN01	128 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SGSM2	O43147	1006 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	UPP2	O95045	317 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	PARN	O95453	639 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	RXRA	P19793	462 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SEMA3F	Q13275	785 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	GNPTAB	Q3T906	1256 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SERINC5	Q86VE9	423 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	ZNF654	Q8IZM8	581 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	CMTR1	Q8N1G2	835 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SAMD3	Q8N6K7	520 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SMARCC2	Q8TAQ2	1214 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	IGDCC4	Q8TDY8	1250 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	HLA-C	Q95604	372 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	TGS1	Q96RS0	853 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	RNPEP	Q9H4A4	650 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	SETD4	Q9NVD3	440 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	PKD2L1	Q9P0L9	805 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	RBM8A	Q9Y5S9	174 aa	Known RBP	10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	CHD9	Q3L8U1	2897 aa		10.11	□□□□□ -0.79
TARDBP-222	ENST00000620505	MYO9B	Q13459	2157 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	hCG_1642624	A0A1W2PR95	340 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	SPATA31C2	B4DYI2	1134 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	PLEKHA8P1	O95397	391 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	AMH	P03971	560 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	TGFB3	P10600	412 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	ERVK-21	P61565	698 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	TRAF1	Q13077	416 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	COL9A3	Q14050	684 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	NFXL1	Q6ZNB6	911 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	CCDC82	Q8N4S0	544 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	CTCFL	Q8NI51	663 aa	Predicted RBP	10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	CUL5	Q93034	780 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	RRP36	Q96EU6	259 aa	Known RBP	10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	GPR20	Q99678	358 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	EPHX3	Q9H6B9	360 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	LY9	Q9HBG7	655 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	COG5	Q9UP83	839 aa		10.1	□□□□□ -0.79
TARDBP-222	ENST00000620505	VCAN	P13611	3396 aa		10.09	□□□□□ -0.79
TARDBP-222	ENST00000620505	FIBP	O43427	364 aa		10.09	□□□□□ -0.79
TARDBP-222	ENST00000620505	PRC1	O43663	620 aa		10.09	□□□□□ -0.79
TARDBP-222	ENST00000620505	EFCAB14	O75071	495 aa		10.09	□□□□□ -0.79
TARDBP-222	ENST00000620505	ICAM3	P32942	547 aa		10.09	□□□□□ -0.79

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