RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 GCNT4Q9P109 453 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 TUBE1Q9UJT0 475 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 PNPLA7Q6ZV29 1317 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 A0A1B0GUA9 196 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 LRRC53A6NM62 1247 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 TNNI1P19237 187 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 UBXN2AP68543 259 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ATP2C1P98194 919 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 CHURC1Q8WUH1 139 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 AP1M1Q9BXS5 423 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 SRP68Q9UHB9 627 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 MRPL11Q9Y3B7 192 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 A0A1B0GTH6 734 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 FAM205CA6NFA0 338 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 TCP10L2B9ZVM9 353 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 GIPC1O14908 333 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 GAP43P17677 238 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 CNGA1P29973 690 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 GFPT1Q06210 699 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 IFT88Q13099 833 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 GRM4Q14833 912 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ABCB5Q2M3G0 1257 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 KIAA0825Q8IV33 1275 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ZCCHC17Q9NP64 241 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 NFU1Q9UMS0 254 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PALMO75781 387 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 OATP04181 439 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 KRT81Q14533 505 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 AMNQ9BXJ7 453 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 MINPP1Q9UNW1 487 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ATP1A1P05023 1023 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 YWHAEP62258 255 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 MESDQ14696 234 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ODR4Q5SWX8 454 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 C10orf76Q5T2E6 689 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 LRCH2Q5VUJ6 765 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 CCDC89Q8N998 374 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 RAD54LQ92698 747 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 CPVLQ9H3G5 476 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 USP17L5A8MUK1 530 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PRDX5P30044 214 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 DPYDQ12882 1025 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PPM1KQ8N3J5 372 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 IWS1Q96ST2 819 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PHF20Q9BVI0 1012 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
ALMS1-208ENST00000620466 TMEM260Q9NX78 707 aa9.08□□□□□ -0.96
ALMS1-208ENST00000620466 PASKQ96RG2 1323 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 TTC26A0AVF1 554 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 FOSP01100 380 aaPredicted RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 GPR162Q16538 588 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 RAB20Q9NX57 234 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 STIM2Q9P246 746 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 AFG3L2Q9Y4W6 797 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 AGLP35573 1532 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 THAP12O43422 761 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 NCK2O43639 380 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 VPS41P49754 854 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 XKR9Q5GH70 373 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 DEPTORQ8TB45 409 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 TMEM47Q9BQJ4 181 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SPC25Q9HBM1 224 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 HOMER3Q9NSC5 361 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 CEP72Q9P209 647 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 PCDHA6Q9UN73 950 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 ATP8A1Q9Y2Q0 1164 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 PCDHA8Q9Y5H6 950 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 STAM2O75886 525 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 ATF2P15336 505 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 PCK1P35558 622 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 MAP2K2P36507 400 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 NR1I3Q14994 352 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SNCBQ16143 134 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SEPT14Q6ZU15 432 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 PPFIBP2Q8ND30 876 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 TECPR2O15040 1411 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 POTEMA6NI47 508 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 ABL1P00519 1130 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 ARHGEF2Q92974 986 aaKnown RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SEPT10Q9P0V9 454 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 LIMA1Q9UHB6 759 aaKnown RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 A0A087WUV0 522 aaPredicted RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 NR1D1P20393 614 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SNAP25P60880 206 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 TXNRD1Q16881 649 aa9.07□□□□□ -0.96
ALMS1-208ENST00000620466 RBM43Q6ZSC3 357 aaKnown RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 SRBD1Q8N5C6 995 aaKnown RBP9.07□□□□□ -0.96
ALMS1-208ENST00000620466 IRX2Q9BZI1 471 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms