RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 MAML3Q96JK9 1138 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 CDHR1Q96JP9 859 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 AK8Q96MA6 479 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 RIT2Q99578 217 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 ZNF577Q9BSK1 485 aa9.06□□□□□ -0.96
CPNE3-209ENST00000620393 AGO4Q9HCK5 861 aaKnown RBP9.06□□□□□ -0.96
CPNE3-209ENST00000620393 DDX49Q9Y6V7 483 aaKnown RBP9.06□□□□□ -0.96
CPNE3-209ENST00000620393 A0A1B0GVL5 298 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
CPNE3-209ENST00000620393 DHX15O43143 795 aaKnown RBP9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TRAK2O60296 914 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 ATP9AO75110 1047 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 PSMD10O75832 226 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 SNAI1O95863 264 aaPredicted RBP9.05□□□□□ -0.96
CPNE3-209ENST00000620393 MBD3O95983 291 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TGFB3P10600 412 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
CPNE3-209ENST00000620393 CYP2B6P20813 491 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 HOXD10P28358 340 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 RGS2P41220 211 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TMEM266Q2M3C6 531 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 SPECC1Q5M775 1068 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 KCNV1Q6PIU1 500 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 USP49Q70CQ1 688 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 ARMCX2Q7L311 632 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 OTOP1Q7RTM1 612 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 FSIP1Q8NA03 581 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 GPT2Q8TD30 523 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 MRPS27Q92552 414 aaKnown RBP9.05□□□□□ -0.96
CPNE3-209ENST00000620393 GJA10Q969M2 543 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 EPSTI1Q96J88 318 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 UIMC1Q96RL1 719 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 SENP7Q9BQF6 1050 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TINF2Q9BSI4 451 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 RAB34Q9BZG1 259 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 ARHGAP39Q9C0H5 1083 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 CCSER1Q9C0I3 900 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 TBC1D22BQ9NU19 505 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 A0A0G2JMZ2 1700 aa9.05□□□□□ -0.96
CPNE3-209ENST00000620393 GAS7O60861 476 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 FKTNO75072 461 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 IGHA2P01877 340 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 LIG1P18858 919 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 CDC25AP30304 524 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 UBA7P41226 1012 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 NDUFA8P51970 172 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 SPIRE1Q08AE8 756 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 ITGB3BPQ13352 177 aaPredicted RBP9.04□□□□□ -0.96
CPNE3-209ENST00000620393 PPP2R5CQ13362 524 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 SNW1Q13573 536 aaKnown RBP9.04□□□□□ -0.96
CPNE3-209ENST00000620393 ARHGEF6Q15052 776 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 KLHL40Q2TBA0 621 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 B3GNT9Q6UX72 402 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 SEPT14Q6ZU15 432 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 ENGASEQ8NFI3 743 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 SYMPKQ92797 1274 aaKnown RBP9.04□□□□□ -0.96
CPNE3-209ENST00000620393 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 TEKT3Q9BXF9 490 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 GOLPH3LQ9H4A5 285 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
CPNE3-209ENST00000620393 LRWD1Q9UFC0 647 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 VAV3Q9UKW4 847 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 KCNH3Q9ULD8 1083 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 NFASCO94856 1347 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 SYNGAP1Q96PV0 1343 aa9.04□□□□□ -0.96
CPNE3-209ENST00000620393 RBM47A0AV96 593 aaKnown RBP9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SLC26A4O43511 780 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 ZNF202O95125 648 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 GNRH1P01148 92 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 PFKFB1P16118 471 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 KCNA2P16389 499 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SYKP43405 635 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 FLT3LGP49771 235 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 CAP1Q01518 475 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SP2Q02086 613 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 IRF5Q13568 498 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 NEDD9Q14511 834 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 EPHA7Q15375 998 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 KRT79Q5XKE5 535 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 IQSEC1Q6DN90 963 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 TAPT1Q6NXT6 567 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 CCDC62Q6P9F0 684 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 CCDC73Q6ZRK6 1079 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 EEPD1Q7L9B9 569 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 CABP7Q86V35 215 aa9.03□□□□□ -0.96
CPNE3-209ENST00000620393 FMR1NBQ8N0W7 255 aaPredicted RBP9.03□□□□□ -0.96
CPNE3-209ENST00000620393 GIMAP8Q8ND71 665 aaPredicted RBP9.03□□□□□ -0.96
CPNE3-209ENST00000620393 SCFD2Q8WU76 684 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms