RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 HMGCRP04035 888 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 TXNP10599 105 aaKnown RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 CMA1P23946 247 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 TECP42680 631 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 PPP2R5CQ13362 524 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 ZNF746Q6NUN9 644 aaPredicted RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 DHX37Q8IY37 1157 aaKnown RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 C4orf32Q8N8J7 132 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 SYAP1Q96A49 352 aaPredicted RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 LENG9Q96B70 501 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 FGD4Q96M96 766 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.422e-9■□□□□ 9.3
SNORD3D-201ENST00000619178 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 MLXIPQ9HAP2 919 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 GDPD2Q9HCC8 539 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 JPH1Q9HDC5 661 aaPredicted RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 SLC9A2Q9UBY0 812 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 ZHX1Q9UKY1 873 aaPredicted RBP12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 FAM184BQ9ULE4 1060 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 SAMM50Q9Y512 469 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 TRIM17Q9Y577 477 aa12.42□□□□□ -0.42
SNORD3D-201ENST00000619178 ASTN1O14525 1302 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 RBM47A0AV96 593 aaKnown RBP12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 WDR64B1ANS9 1081 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 MSCO60682 206 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 PSMD10O75832 226 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 GH1P01241 217 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 ARP10275 920 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 AKR1A1P14550 325 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 LAMC2Q13753 1193 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 EEPD1Q7L9B9 569 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 MIER3Q7Z3K6 550 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 FBXO16Q8IX29 292 aaPredicted RBP12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 HAS1Q92839 578 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 TMEM60Q9H2L4 133 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 SPC25Q9HBM1 224 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 Q9Y3F1 56 aa12.41□□□□□ -0.42
SNORD3D-201ENST00000619178 EVPLQ92817 2033 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 WNT7AO00755 349 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 SNAI1O95863 264 aaPredicted RBP12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 PSAPP07602 524 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 TNFAIP2Q03169 654 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 FAM160B1Q5W0V3 765 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 RESP18Q5W5W9 173 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 NCAPH2Q6IBW4 605 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 MIS18BP1Q6P0N0 1132 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 METTL7BQ6UX53 244 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 OTOP1Q7RTM1 612 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 AP5M1Q9H0R1 490 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 TUFT1Q9NNX1 390 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 DDX41Q9UJV9 622 aaKnown RBP12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 GABRQQ9UN88 632 aa12.4□□□□□ -0.42
SNORD3D-201ENST00000619178 EDIL3O43854 480 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 KINO60870 393 aaKnown RBP12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 RGS20O76081 388 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 GGPS1O95749 300 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 KCNA2P16389 499 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 CTGFP29279 349 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 GRK4P32298 578 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 FAM160A1Q05DH4 1040 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 EPHA7Q15375 998 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 CABP7Q86V35 215 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 FSIP1Q8NA03 581 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 ATP6V0A1Q93050 837 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 EMID1Q96A84 441 aaPredicted RBP12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 AZI2Q9H6S1 392 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 DISC1Q9NRI5 854 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 PKD2L1Q9P0L9 805 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 DDX49Q9Y6V7 483 aaKnown RBP12.39□□□□□ -0.43
SNORD3D-201ENST00000619178 DDX39AO00148 427 aaKnown RBP12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 ZEB2O60315 1214 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 P4HBP07237 508 aaKnown RBP12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 UBA1P22314 1058 aaKnown RBP12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 RPA1P27694 616 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 CNGA1P29973 690 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 CYP2C19P33261 490 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 SYKP43405 635 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 CPT1AP50416 773 aa12.38□□□□□ -0.43
SNORD3D-201ENST00000619178 SLC26A2P50443 739 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms