RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SLC4A1P02730 911 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 PTK2Q05397 1052 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 TERF2Q15554 542 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CNGA3Q16281 694 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 NPATQ14207 1427 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 MYH11P35749 1972 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CAPRIN1Q14444 709 aaKnown RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 ZNF827Q17R98 1081 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 FAM81BQ96LP2 452 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 VAMP4O75379 141 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 TBC1D23Q9NUY8 699 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 ARHGAP26Q9UNA1 814 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CFBP00751 764 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 KRT39Q6A163 491 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 FBXO18Q8NFZ0 1043 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 NFU1Q9UMS0 254 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CARMIL3Q8ND23 1372 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
PCDHA4-204ENST00000618834 CA4P22748 312 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 DYNLT1P63172 113 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PRDM1O75626 825 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 GLG1Q92896 1179 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 SFMBT1Q9UHJ3 866 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ZNF532Q9HCE3 1301 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 TM6SF1Q9BZW5 370 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PYROXD1Q8WU10 500 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 CCDC195A0A1B0GUA6 201 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ACRBPQ8NEB7 543 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 LZICQ8WZA0 190 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 EIF4A2Q14240 407 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 TBCCQ15814 346 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PNMA2Q9UL42 364 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 PCDHA13Q9Y5I0 950 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 BLMP54132 1417 aaPredicted RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 NUGGCQ68CJ6 796 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 EYA2O00167 538 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 XPAP23025 273 aaPredicted RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 HNRNPH2P55795 449 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 TRIP13Q15645 432 aaPredicted RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 CDC26Q8NHZ8 85 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 STXBP3O00186 592 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 HABP4Q5JVS0 413 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 CHCHD3Q9NX63 227 aaKnown RBP12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
PCDHA4-204ENST00000618834 LAD1O00515 517 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 TMED10P49755 219 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 SH3GL2Q99962 352 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 METTL22Q9BUU2 404 aaPredicted RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 G3BP2Q9UN86 482 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 A0A1W2PQ27 194 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 A0A1W2PQ64 194 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 A0A1W2PQD8 194 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 PFKFB2O60825 505 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 DEAF1O75398 565 aaPredicted RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 AP1B1Q10567 949 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 ELAC2Q9BQ52 826 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 ATP8A2Q9NTI2 1148 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 FRA10AC1Q70Z53 315 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 ADPGKQ9BRR6 497 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 ASPSCR1Q9BZE9 553 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 MED7O43513 233 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 AFPP02771 609 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 PPARAQ07869 468 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 FAM167BQ9BTA0 163 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
PCDHA4-204ENST00000618834 DNAJC24Q6P3W2 148 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms