RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PSMC2P35998 433 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 MSH2P43246 934 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 POLR2FP61218 127 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 MRPL40Q9NQ50 206 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 CUL7Q14999 1698 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GRID2IPA4D2P6 1211 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PRPF6O94906 941 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 TTBK2Q6IQ55 1244 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MIS18BP1Q6P0N0 1132 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 FOXR1Q6PIV2 292 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SHC4Q6S5L8 630 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RSRC2Q7L4I2 434 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 PROCA1Q8NCQ7 364 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 GSDMBQ8TAX9 411 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 TACO1Q9BSH4 297 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ARIH1Q9Y4X5 557 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 TTI1O43156 1089 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MFAP3LO75121 409 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 IGKV5-2P06315 115 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PLA2G4BP0C869 781 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PLTPP55058 493 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 COG7P83436 770 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 GPATCH4Q5T3I0 446 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 LRRN4CLQ8ND94 238 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ATP6V1E2Q96A05 226 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PRDM5Q9NQX1 630 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 PALMO75781 387 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SASH1O94885 1247 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CASP14P31944 242 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 FMR1Q06787 632 aaKnown RBP eCLIP3.31□□□□□ -1.88
LPP-221ENST00000618621 DPH6Q7L8W6 267 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 KRT26Q7Z3Y9 468 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MAPKAPK5Q8IW41 473 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 KCTD6Q8NC69 237 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 VIPAS39Q9H9C1 493 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ZNF446Q9NWS9 450 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SRP68Q9UHB9 627 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 PRKAB2O43741 272 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CTDNEP1O95476 244 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PDE6CP51160 858 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SLC12A2P55011 1212 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 BRDTQ58F21 947 aaPredicted RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 KLHL29Q96CT2 875 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 ZNF148Q9UQR1 794 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 BCS1LQ9Y276 419 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 SPATA31A3Q5VYP0 1347 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 BZW1Q7L1Q6 419 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 EGFL6Q8IUX8 553 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 RNF31Q96EP0 1072 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 CCT8L2Q96SF2 557 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 MRPL47Q9HD33 250 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 ADD3Q9UEY8 706 aaKnown RBP3.31□□□□□ -1.88
LPP-221ENST00000618621 PCDHB4Q9Y5E5 795 aa3.31□□□□□ -1.88
LPP-221ENST00000618621 PVALEFA0A1B0GWK0 134 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MRPS9P82933 396 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SLC7A5Q01650 507 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NCAPHQ15003 741 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 APOA5Q6Q788 366 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 EPYCQ99645 322 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 IPO11Q9UI26 975 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SCOCQ9UIL1 159 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 BIVM-ERCC5R4GMW8 1640 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PSEN1P49768 467 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KCNB1Q14721 858 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ARHGEF16Q5VV41 709 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KCTD16Q68DU8 428 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SUPT20HQ8NEM7 779 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.3□□□□□ -1.882e-6■■■■■ 57
LPP-221ENST00000618621 CPSF1Q10570 1443 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 ABCA1O95477 2261 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KDRP35968 1356 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 KDM5DQ9BY66 1539 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PCDH11XQ9BZA7 1347 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PCDH11YQ9BZA8 1340 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 RAPGEF6Q8TEU7 1601 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TULP2O00295 520 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MYCLP12524 364 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 ESRRGP62508 458 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 C2orf54Q08AI8 447 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 DRP2Q13474 957 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CERKLQ49MI3 558 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 FAM178BQ8IXR5 827 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SRRM1Q8IYB3 904 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 NME8Q8N427 588 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PRPF31Q8WWY3 499 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 HAUS8Q9BT25 410 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 ZNF408Q9H9D4 720 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TACC3Q9Y6A5 838 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 NPHP4O75161 1426 aaPredicted RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 SBNO1A3KN83 1393 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SART1O43290 800 aaKnown RBP3.3□□□□□ -1.88
LPP-221ENST00000618621 GPC4O75487 556 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 PRCPP42785 496 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 TSHZ1Q6ZSZ6 1077 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 MAEAQ7L5Y9 396 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CNBD1Q8NA66 436 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CFAP61Q8NHU2 1237 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 HVCN1Q96D96 273 aa3.3□□□□□ -1.88
LPP-221ENST00000618621 CXorf56Q9H5V9 222 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms