RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ZMYND12Q9H0C1 365 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 FAM184BQ9ULE4 1060 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 STAT3P40763 770 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 EVCP57679 992 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 MTERF2Q49AM1 385 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 RASAL2Q9UJF2 1139 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
CIITA-213ENST00000618327 PPP2R2CQ9Y2T4 447 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 RHOXF2BP0C7M4 288 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 CNGA1P29973 690 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 PRAMEF18Q5VWM3 479 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 RHOXF2Q9BQY4 288 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 TMEM206Q9H813 350 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
CIITA-213ENST00000618327 CXCL9Q07325 125 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 ZNF280CQ8ND82 737 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 ACAD9Q9H845 621 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 DISP2A7MBM2 1401 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 PALM3A6NDB9 673 aaPredicted RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 ZNF500O60304 480 aaPredicted RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 FAM47CQ5HY64 1035 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 LIN9Q5TKA1 542 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 ERO1AQ96HE7 468 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 FERMT1Q9BQL6 677 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 UBE2Q2LH0YL09 131 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 IPO5O00410 1097 aaKnown RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 FAM163AQ96GL9 167 aaPredicted RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 CCDC94Q9BW85 323 aaPredicted RBP15.22■□□□□ 0.03
CIITA-213ENST00000618327 EHD4Q9H223 541 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 WDR64B1ANS9 1081 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 FOXN1O15353 648 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 CD19P15391 556 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 TNNC1P63316 161 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 COG2Q14746 738 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 VSTM4Q8IW00 320 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 HACL1Q9UJ83 578 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 PYCARDQ9ULZ3 195 aa15.22■□□□□ 0.03
CIITA-213ENST00000618327 RIOK3O14730 519 aaKnown RBP15.21■□□□□ 0.03
CIITA-213ENST00000618327 RBL2Q08999 1139 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.03
CIITA-213ENST00000618327 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
CIITA-213ENST00000618327 DDTLA6NHG4 134 aaPredicted RBP15.21■□□□□ 0.03
CIITA-213ENST00000618327 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 C19orf81C9J6K1 198 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
CIITA-213ENST00000618327 LMNB1P20700 586 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 CEP55Q53EZ4 464 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 SARM1Q6SZW1 724 aa15.21■□□□□ 0.03
CIITA-213ENST00000618327 KRT76Q01546 638 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 PLCB3Q01970 1234 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 PDIA5Q14554 519 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 BANK1Q8NDB2 785 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 DYDC2Q96IM9 177 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 BPIFA3Q9BQP9 254 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 CARD6Q9BX69 1037 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.02
CIITA-213ENST00000618327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.21■□□□□ 0.02
CIITA-213ENST00000618327 POTEFA5A3E0 1075 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
CIITA-213ENST00000618327 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
CIITA-213ENST00000618327 POTEIP0CG38 1075 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 CAPN2P17655 700 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 GOLGA8FQ08AF8 430 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 GOLGA8DPQ0D2H9 430 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 POTEGQ6S5H5 508 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 POTEEQ6S8J3 1075 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 PPM1KQ8N3J5 372 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 U2AF1L4Q8WU68 220 aaKnown RBP15.2■□□□□ 0.02
CIITA-213ENST00000618327 CCSER1Q9C0I3 900 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 KRT31Q15323 416 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 SEL1L2Q5TEA6 688 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 METTL16Q86W50 562 aaKnown RBP15.2■□□□□ 0.02
CIITA-213ENST00000618327 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 TUBBP07437 444 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 PRCPP42785 496 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 EXOC8Q8IYI6 725 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 NTRK3Q16288 839 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 CRY2Q49AN0 593 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 NEK9Q8TD19 979 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 PCIF1Q9H4Z3 704 aa15.2■□□□□ 0.02
CIITA-213ENST00000618327 SLC8A3P57103 927 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 MYL7Q01449 175 aa15.19■□□□□ 0.02
CIITA-213ENST00000618327 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms