RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 GUCY2DQ02846 1103 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 INTS9Q9NV88 658 aaKnown RBP12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 FAF1Q9UNN5 650 aaPredicted RBP12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 CIAO1O76071 339 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 PCGF5Q86SE9 256 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 TUBB6Q9BUF5 446 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF212Q9UDV6 495 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 TMCC1O94876 653 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 LRRN2O75325 713 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 CALN1Q9BXU9 219 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 CSPG5O95196 566 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 LRRC8AQ8IWT6 810 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 RNF26Q9BY78 433 aaPredicted RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 PHLPP2Q6ZVD8 1323 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 ARHGDIAP52565 204 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 UBE3CQ15386 1083 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 ITM2BQ9Y287 266 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 BBOX1O75936 387 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 SIK1P57059 783 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 PI4KBQ9UBF8 816 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 MYH10P35580 1976 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 KRT1P04264 644 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 BMP3P12645 472 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 PHKG2P15735 406 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 NDUFA8P51970 172 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 COPB1P53618 953 aaKnown RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 ARPP19P56211 112 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 SLFN12LQ6IEE8 588 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 LZICQ8WZA0 190 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
CCDC144B-208ENST00000618081 PDE8BO95263 885 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 ANGPTL8Q6UXH0 198 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 ECEL1O95672 775 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 DEUP1Q05D60 604 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 SNCBQ16143 134 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 TAB3Q8N5C8 712 aaPredicted RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 PBKQ96KB5 322 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 FKBP3Q00688 224 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 N4BP2L2Q92802 583 aaPredicted RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 CLRN2A0PK11 232 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 HSPA6P17066 643 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 TCP11Q8WWU5 503 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 HEXIM2Q96MH2 286 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 IGSF3O75054 1194 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 NPR1P16066 1061 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 SPOPLQ6IQ16 392 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 URGCPQ8TCY9 931 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 LAMC1P11047 1609 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 A0A0D9SFI3 127 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 PPP6R2O75170 966 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 TAC1P20366 129 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 EEF1B2P24534 225 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
CCDC144B-208ENST00000618081 FMNL1O95466 1100 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF18P17022 549 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 YWHAHQ04917 246 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SNX1Q13596 522 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 QTRT2Q9H974 415 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 PGRMC1O00264 195 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SEC24BO95487 1268 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 TBCCQ15814 346 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 SNX19Q92543 992 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 POLR3CQ9BUI4 534 aaPredicted RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 FANCLQ9NW38 375 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 CA4P22748 312 aa12.03□□□□□ -0.48
CCDC144B-208ENST00000618081 MAP2K2P36507 400 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms