RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 ACSF2Q96CM8 615 aaPredicted RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 PLEKHF1Q96S99 279 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 DCTN4Q9UJW0 460 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 CARMIL3Q8ND23 1372 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 USP42Q9H9J4 1324 aaKnown RBP6.07□□□□□ -1.44
CUL3-216ENST00000617432 KIF13BQ9NQT8 1826 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 SCN7AQ01118 1682 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 GOLGB1Q14789 3259 aaKnown RBP6.07□□□□□ -1.44
CUL3-216ENST00000617432 KDM3BQ7LBC6 1761 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 SHISA3A0PJX4 238 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 SLPIP03973 132 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 A1BGP04217 495 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 IGFBP6P24592 240 aaPredicted RBP6.07□□□□□ -1.44
CUL3-216ENST00000617432 NCKAP1LP55160 1127 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 LAPTM5Q13571 262 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 GPR162Q16538 588 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 LIPIQ6XZB0 460 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 CCDC146Q8IYE0 955 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 TTC9BQ8N6N2 239 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 HHIPL1Q96JK4 782 aa6.07□□□□□ -1.44
CUL3-216ENST00000617432 RBM15Q96T37 977 aaKnown RBP eCLIP6.07□□□□□ -1.44
CUL3-216ENST00000617432 RRP7AQ9Y3A4 280 aaKnown RBP6.07□□□□□ -1.44
CUL3-216ENST00000617432 COL15A1P39059 1388 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 HEG1Q9ULI3 1381 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 IRS2Q9Y4H2 1338 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 SOWAHDA6NJG2 315 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 ZNF20P17024 532 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 PFKLP17858 780 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 TACR2P21452 398 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 RFC4P35249 363 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 TEFQ10587 303 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 DSC3Q14574 896 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 CBX2Q14781 532 aaPredicted RBP6.06□□□□□ -1.44
CUL3-216ENST00000617432 ZNF790Q6PG37 636 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 HOMEZQ8IX15 550 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 PLCD4Q9BRC7 762 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 OSBPL7Q9BZF2 842 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 NUDCQ9Y266 331 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 USP16Q9Y5T5 823 aa6.06□□□□□ -1.44
CUL3-216ENST00000617432 AFDNP55196 1824 aaKnown RBP6.05□□□□□ -1.44
CUL3-216ENST00000617432 A0A0G2JLW4 131 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 POLRMTO00411 1230 aaKnown RBP6.05□□□□□ -1.44
CUL3-216ENST00000617432 DPEP1P16444 411 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 MAPK1P28482 360 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 CHRNA5P30532 468 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 RTP1P59025 263 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 VWA3BQ502W6 1294 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 TTBK2Q6IQ55 1244 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 GALNT18Q6P9A2 607 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 TTC5Q8N0Z6 440 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 SAMD11Q96NU1 681 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 SPATA25Q9BR10 227 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 ASPNQ9BXN1 380 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 GTF3C3Q9Y5Q9 886 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 LAMB4A4D0S4 1761 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 BCORQ6W2J9 1755 aa6.05□□□□□ -1.44
CUL3-216ENST00000617432 COL11A2P13942 1736 aaPredicted RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 NRXN2Q9P2S2 1712 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 MYBBP1AQ9BQG0 1328 aaKnown RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 BRCA1P38398 1863 aaKnown RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 TREHO43280 583 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 KCNA3P22001 575 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 CNR2P34972 360 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 ACVRL1P37023 503 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 MAPK8P45983 427 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 LIMS1P48059 325 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 TBC1D9BQ66K14 1250 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 ASCC2Q9H1I8 757 aaPredicted RBP6.04□□□□□ -1.44
CUL3-216ENST00000617432 SUSD2Q9UGT4 822 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 CD2APQ9Y5K6 639 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 DUSP10Q9Y6W6 482 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 ANKRD31Q8N7Z5 1873 aa6.04□□□□□ -1.44
CUL3-216ENST00000617432 LMNB1P20700 586 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 TM4SF1P30408 202 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 EIF5P55010 431 aaKnown RBP6.03□□□□□ -1.44
CUL3-216ENST00000617432 PDE4CQ08493 712 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 RALBP1Q15311 655 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 CRB2Q5IJ48 1285 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 LSRQ86X29 649 aaPredicted RBP6.03□□□□□ -1.44
CUL3-216ENST00000617432 FBF1Q8TES7 1133 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
CUL3-216ENST00000617432 KREMEN1Q96MU8 473 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 PRKRIP1Q9H875 184 aaPredicted RBP6.03□□□□□ -1.44
CUL3-216ENST00000617432 NARFQ9UHQ1 456 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 CHD4Q14839 1912 aa6.03□□□□□ -1.44
CUL3-216ENST00000617432 TMEM82A0PJX8 343 aa6.02□□□□□ -1.45
CUL3-216ENST00000617432 WTIPA6NIX2 430 aaPredicted RBP6.02□□□□□ -1.45
CUL3-216ENST00000617432 CAMTA2O94983 1202 aa6.02□□□□□ -1.45
CUL3-216ENST00000617432 YARSP54577 528 aaKnown RBP6.02□□□□□ -1.45
CUL3-216ENST00000617432 SEPT6Q14141 434 aa6.02□□□□□ -1.45
CUL3-216ENST00000617432 TARBP2Q15633 366 aaKnown RBP6.02□□□□□ -1.45
CUL3-216ENST00000617432 ADGRG2Q8IZP9 1017 aa6.02□□□□□ -1.45
CUL3-216ENST00000617432 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms