RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 GNA14O95837 355 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 ATP1A3P13637 1013 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 RASA1P20936 1047 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 CASP14P31944 242 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 PPP2R5CQ13362 524 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 COG2Q14746 738 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 RPS6KA1Q15418 735 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 C8orf74Q6P047 294 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 ACER1Q8TDN7 264 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 DYDC2Q96IM9 177 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 MAN1B1Q9UKM7 699 aa11.1□□□□□ -0.63
SMARCA1-205ENST00000617310 LMNB1P20700 586 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.638e-7■■■■■ 27.4
SMARCA1-205ENST00000617310 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 CASC4Q6P4E1 433 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 TRIML1Q8N9V2 468 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 UBLCP1Q8WVY7 318 aaPredicted RBP11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 FAM151AQ8WW52 585 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 DDX12PQ92771 950 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 NT5C1BQ96P26 610 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 RGL1Q9NZL6 768 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 PCDHB4Q9Y5E5 795 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ADGRB1O14514 1584 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 CCDC66A2RUB6 948 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 MYL7Q01449 175 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 DDR1Q08345 913 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 KSR1Q8IVT5 923 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF653Q96CK0 615 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 MMP19Q99542 508 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 STIM2Q9P246 746 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ORC4O43929 436 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 CUL4BQ13620 913 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 CCDC105Q8IYK2 499 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 UBL4BQ8N7F7 174 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 MICAL1Q8TDZ2 1067 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 STK17AQ9UEE5 414 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 MTRF1LQ9UGC7 380 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 PREX1Q8TCU6 1659 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 INPP5BP32019 993 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ECE1P42892 770 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 MXI1P50539 228 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ATG4CQ96DT6 458 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 PAGE5Q96GU1 130 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 ACCSQ96QU6 501 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 TSGA10Q9BZW7 698 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 KCNK9Q9NPC2 374 aa11.09□□□□□ -0.63
SMARCA1-205ENST00000617310 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 WDR64B1ANS9 1081 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 SLC16A4O15374 487 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 PDE6CP51160 858 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 CCL15Q16663 113 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 TEX13BQ9BXU2 312 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 SUGT1Q9Y2Z0 365 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 ZEB2O60315 1214 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 U2AF2P26368 475 aaKnown RBP eCLIP11.08□□□□□ -0.645e-7■■■□□ 15.5
SMARCA1-205ENST00000617310 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 KCNQ5Q9NR82 932 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 POLIQ9UNA4 740 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 SPATA31D1Q6ZQQ2 1576 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 H2AFZP0C0S5 128 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 C6orf222P0C671 652 aaPredicted RBP11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 PTPREP23469 700 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 GABPAQ06546 454 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 H2AFVQ71UI9 128 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 RAET1EQ8TD07 263 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 SPATA33Q96N06 139 aa11.08□□□□□ -0.64
SMARCA1-205ENST00000617310 IQGAP1P46940 1657 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 KIF28PB7ZC32 967 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 NSFP46459 744 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 KAZNQ674X7 775 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 RHPN2Q8IUC4 686 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 MSTO1Q9BUK6 570 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 LRRC4BQ9NT99 713 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms