RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SIP14410 1827 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 NCOR1O75376 2440 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 SPATA31C2B4DYI2 1134 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 NOP56O00567 594 aaKnown RBP23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 LPXNO60711 386 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 GJB5O95377 273 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 SMIM10L2AP0DMW4 78 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 SMIM10L2BP0DMW5 78 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 HOXC8P31273 242 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 THPOP40225 353 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 USP17L6PQ6QN14 398 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 CYFIP1Q7L576 1253 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 ATP6V0A1Q93050 837 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 RRP36Q96EU6 259 aaKnown RBP23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 BDP1A6H8Y1 2624 aa23.98■■□□□ 1.43
TRAPPC3-208ENST00000616074 PRC1O43663 620 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 EFCAB14O75071 495 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 LGR5O75473 907 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 COL9A3Q14050 684 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 NEDD9Q14511 834 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 CASC1Q6TDU7 716 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 METTL7BQ6UX53 244 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 SMARCC2Q8TAQ2 1214 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 RAD9AQ99638 391 aa23.97■■□□□ 1.43
TRAPPC3-208ENST00000616074 EMSYQ7Z589 1322 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 RSPH10B2B2RC85 870 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 MEIS2O14770 477 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 TREHO43280 583 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 FIBPO43427 364 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 RSPH10BP0C881 870 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 BMP1P13497 986 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 KIF5BP33176 963 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 KCNQ1P51787 676 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 FAM117BQ6P1L5 589 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 GDPD5Q8WTR4 605 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 GPR20Q99678 358 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 MTA3Q9BTC8 594 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 USP26Q9BXU7 913 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 LSG1Q9H089 658 aaKnown RBP23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 RNPEPQ9H4A4 650 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 TELO2Q9Y4R8 837 aa23.96■■□□□ 1.43
TRAPPC3-208ENST00000616074 PIK3CDO00329 1044 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 SH2B2O14492 632 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 SMARCA1P28370 1054 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 MKRN4PQ13434 485 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 PCNX4Q63HM2 1172 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 TRIM50Q86XT4 487 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 DBF4BQ8NFT6 615 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 CUL5Q93034 780 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 NECAB3Q96P71 396 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 SEC63Q9UGP8 760 aaKnown RBP23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 MTUS1Q9ULD2 1270 aa23.95■■□□□ 1.42
TRAPPC3-208ENST00000616074 LINC01553A4QN01 128 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 RXRAP19793 462 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 MCM5P33992 734 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 AAK1Q2M2I8 961 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 NFXL1Q6ZNB6 911 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 SRBD1Q8N5C6 995 aaKnown RBP23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 LZTS2Q9BRK4 669 aa23.94■■□□□ 1.42
TRAPPC3-208ENST00000616074 CCDC69A6NI79 296 aa23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 PLEKHG4Q58EX7 1191 aa23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 TMEM87BQ96K49 555 aa23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 TGS1Q96RS0 853 aaKnown RBP23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 SETD4Q9NVD3 440 aa23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 COG5Q9UP83 839 aa23.93■■□□□ 1.42
TRAPPC3-208ENST00000616074 SLC27A2O14975 620 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 CTSHP09668 335 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 GNAQP50148 359 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 ERVK-21P61565 698 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 SP4Q02446 784 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 UTP14CQ5TAP6 766 aaKnown RBP23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 XRRA1Q6P2D8 792 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 RAB11FIP4Q86YS3 637 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 MYOCDQ8IZQ8 938 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 SENP7Q9BQF6 1050 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 OSBPL7Q9BZF2 842 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 SUGCTQ9HAC7 445 aa23.92■■□□□ 1.42
TRAPPC3-208ENST00000616074 KAT6AQ92794 2004 aa23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 AMHP03971 560 aa23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 NLRX1Q86UT6 975 aa23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 TMTC2Q8N394 836 aa23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 ESYT1Q9BSJ8 1104 aa23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 ZNF215Q9UL58 517 aaPredicted RBP23.91■■□□□ 1.42
TRAPPC3-208ENST00000616074 CAND2O75155 1236 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 LIFRP42702 1097 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 CREB3L3Q68CJ9 461 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 LRRC2Q9BYS8 371 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 LMCD1Q9NZU5 365 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 INSL6Q9Y581 213 aa23.9■■□□□ 1.42
TRAPPC3-208ENST00000616074 hCG_1642624A0A1W2PR95 340 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 ATP9AO75110 1047 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 CALM1P0DP23 149 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 CALM2P0DP24 149 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 CALM3P0DP25 149 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 GNAT1P11488 350 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 ADAM17P78536 824 aa23.89■■□□□ 1.41
TRAPPC3-208ENST00000616074 ARHGAP4P98171 946 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms