RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 TCEANC2Q96MN5 208 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 PRDM6Q9NQX0 595 aa17.06■□□□□ 0.32
PRKN-211ENST00000615065 H3BRB1 525 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 ARHGEF15O94989 841 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 CXCL10P02778 98 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 WDR5P61964 334 aaKnown RBP17.05■□□□□ 0.32
PRKN-211ENST00000615065 UBE2SQ16763 222 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 APOA5Q6Q788 366 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 GPR20Q99678 358 aa17.05■□□□□ 0.32
PRKN-211ENST00000615065 TUT1Q9H6E5 874 aaKnown RBP17.05■□□□□ 0.32
PRKN-211ENST00000615065 CNTNAP5Q8WYK1 1306 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 CDC45O75419 566 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
PRKN-211ENST00000615065 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 HOXC8P31273 242 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 KCNJ6P48051 423 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 SP4Q02446 784 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 MBTPS1Q14703 1052 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
PRKN-211ENST00000615065 ADCK5Q3MIX3 580 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 XRRA1Q6P2D8 792 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 TMCO2Q7Z6W1 182 aaPredicted RBP17.04■□□□□ 0.32
PRKN-211ENST00000615065 SERINC5Q86VE9 423 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 CERS4Q9HA82 394 aa17.04■□□□□ 0.32
PRKN-211ENST00000615065 COL4A4P53420 1690 aaPredicted RBP17.04■□□□□ 0.32
PRKN-211ENST00000615065 MICAL3Q7RTP6 2002 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 KAT6AQ92794 2004 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 TRANK1O15050 2925 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 C17orf102A2RUQ5 167 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 DEFB103AP81534 67 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
PRKN-211ENST00000615065 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 ATP6V0A1Q93050 837 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 BRPF3Q9ULD4 1205 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 REV3LO60673 3130 aa17.03■□□□□ 0.32
PRKN-211ENST00000615065 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 RFXAPO00287 272 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 TREHO43280 583 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 THPOP40225 353 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 TAP1Q03518 808 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 TSGA10IPQ3SY00 556 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
PRKN-211ENST00000615065 WWC2Q6AWC2 1192 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
PRKN-211ENST00000615065 NLRX1Q86UT6 975 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.32
PRKN-211ENST00000615065 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
PRKN-211ENST00000615065 KIF28PB7ZC32 967 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 TLL1O43897 1013 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 ATP9AO75110 1047 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 KCNA2P16389 499 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 ITGB5P18084 799 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 FUT2Q10981 343 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 RTN1Q16799 776 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 SETD4Q9NVD3 440 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 RBM28Q9NW13 759 aaKnown RBP17.01■□□□□ 0.31
PRKN-211ENST00000615065 PCDHA6Q9UN73 950 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 PCDHA8Q9Y5H6 950 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 UBIAD1Q9Y5Z9 338 aa17.01■□□□□ 0.31
PRKN-211ENST00000615065 ABHD14A-ACY1A0A1B0GW23 586 aa17■□□□□ 0.31
PRKN-211ENST00000615065 LCHNA4D1U4 455 aa17■□□□□ 0.31
PRKN-211ENST00000615065 SPDYE3A6NKU9 549 aa17■□□□□ 0.31
PRKN-211ENST00000615065 RSPH10B2B2RC85 870 aa17■□□□□ 0.31
PRKN-211ENST00000615065 ZBTB43O43298 467 aa17■□□□□ 0.31
PRKN-211ENST00000615065 LGR5O75473 907 aa17■□□□□ 0.31
PRKN-211ENST00000615065 RSPH10BP0C881 870 aa17■□□□□ 0.31
PRKN-211ENST00000615065 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
PRKN-211ENST00000615065 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
PRKN-211ENST00000615065 PKD2L1Q9P0L9 805 aa17■□□□□ 0.31
PRKN-211ENST00000615065 ZNF215Q9UL58 517 aaPredicted RBP17■□□□□ 0.31
PRKN-211ENST00000615065 SIP14410 1827 aa17■□□□□ 0.31
PRKN-211ENST00000615065 PRRC2BQ5JSZ5 2229 aaKnown RBP17■□□□□ 0.31
PRKN-211ENST00000615065 EMSYQ7Z589 1322 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 KLF18A0A0U1RQI7 1052 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 CTSHP09668 335 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 CPA1P15085 419 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 TCF7P36402 384 aaPredicted RBP16.99■□□□□ 0.31
PRKN-211ENST00000615065 NAPAP54920 295 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 MTMR1Q13613 665 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 IKBKEQ14164 716 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 KRT32Q14532 448 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 GIMAP8Q8ND71 665 aaPredicted RBP16.99■□□□□ 0.31
PRKN-211ENST00000615065 LMBR1Q8WVP7 490 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 CDHR1Q96JP9 859 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 OSBPL7Q9BZF2 842 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms